| MirGeneDB ID | Bta-Mir-324 |
|---|
| Family name |
MIR-324 (all species) |
|---|
| Species |
Cow (Bos taurus) |
|---|
| MiRBase ID |
bta-mir-324
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cfa-Mir-324
Cja-Mir-324
Cpo-Mir-324
Dno-Mir-324
Eca-Mir-324
Ete-Mir-324
Hsa-Mir-324
Laf-Mir-324
Mml-Mir-324
Mmr-Mir-324
Mmu-Mir-324
Ocu-Mir-324
Pab-Mir-324
Rno-Mir-324
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037346.1: 26938018-26938074 [-]
UCSC
Ensembl
|
|---|
| Seed |
GCAUCCC |
|---|
Precursor
(pre-Mir +30nt flank) |
CCUGCAGAAGCUGAACUGGCUAUGCCUCCCCGCAUCCCCUAGGGCAUUGGUGUAAAGCUGGAGACCCACUGCCCCAGGUGCUGCUGGGGGUUGUAGUCUGACCCAUCUGGGAAGAAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCUGCAGAAGCUGAACU--| GC C UCC A U U AAAG
GGCUAU CUCCC GCA CCU GGGCA UGG GU C
CUGAUG GGGGG CGU GGA CCCGU ACC CA U
GAAGAAGGGUCUACCCAGU^ UU U CGU C C - GAGG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | There is a second Dicer cut -2 on both arms. |
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
|---|
Tissue expression
|
| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Bta-Mir-324_5p |
| mirBase accession | MIMAT0009285 |
|---|
| Sequence |
0- CGCAUCCCCUAGGGCAUUGGUGU -23
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: bta-miR-324
|
|---|
| Star sequence |
Bta-Mir-324_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- CCACUGCCCCAGGUGCUGCUGG -57
Get sequence
|
|---|
