MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-2382

Family name MIR-2382 (all species)
Species Cow (Bos taurus)
MiRBase ID bta-mir-2382
Paralogues
Orthologues
Node of Origin (locus) B. taurus
Node of Origin (family) B. taurus
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037352.1: 1742949-1743007 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-2382)
Mir-1842-v1 NC_037352.1: 1742695-1742755 [-] UCSC Ensembl
Mir-1842-v2 NC_037352.1: 1742695-1742754 [-] UCSC Ensembl
Mir-2382 NC_037352.1: 1742949-1743007 [-] UCSC Ensembl
Seed GGGGAGU
Precursor
(pre-Mir +30nt flank)
CUUUGAGGAUGGGCCACUGGCUGCACUUGUAGGGGAGUGCCUGGGAAGCUGUUCCUUUUGGCCGACUACUUCCUGGUGCCUCGCCCCACACCCAGCAGCUUCUGCUCAGAGCCCACAGU
Get precursor sequence
Structure
        10         20         30         40         50        
CUUUGAGGAUGGGCCACU-      ACU-   A   -|  U  - UG     CU   CCUU 
                   GGCUGC    UGU GGG GAG GC C  GGAAG  GUU    U
                   UCGACG    ACA CCC CUC CG G  CCUUC  CAG    U
UGACACCCGAGACUCGUCU      ACCC   C   G^  -  U GU     AU   CCGG 
       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsNo
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-2382_5p

mirBase accessionMIMAT0011930
Sequence
0- AGGGGAGUGCCUGGGAAGCUGUU -23
Get sequence
Proposed targets TargetScanVert: bta-miR-2382-5p
Star sequence

Bta-Mir-2382_3p*

mirBase accessionMIMAT0011931
Sequence
36- UACUUCCUGGUGCCUCGCCCCAC -59
Get sequence
Proposed targets TargetScanVert: bta-miR-2382-3p