MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-2285-P3

Family name MIR-2285 (all species)
Species Cow (Bos taurus)
MiRBase ID bta-mir-2285k-3
Paralogues Bta-Mir-2285-P1  Bta-Mir-2285-P2  Bta-Mir-2285-P4  Bta-Mir-2285-P5  Bta-Mir-2285-P6  Bta-Mir-2285-P7  Bta-Mir-2285-P8  Bta-Mir-2285-P9  Bta-Mir-2285-P10  Bta-Mir-2285-P11 
Orthologues
Node of Origin (locus) B. taurus
Node of Origin (family) B. taurus
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037328.1: 80280624-80280683 [-] UCSC Ensembl
Seed AAACCGG
Precursor
(pre-Mir +30nt flank)
AGGAGAUGAGUCCAAUGUUUUGGGUUGACCUAAAAGUUCAUUUGGGUUUUUCUAUAACAUCUUGCAGAAAAACCGGAAUGAACUUUUUGGCCUACCCAAUAAAUAAAAGGCUUUUCAGAA
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Structure
        10          20        30        40        50         
AGGAGAUGAGUCCAAUGUU--|     UGA  U            G       CUAUAAC 
                     UUGGGU   CC AAAAGUUCAUUU GGUUUUU       A
                     AACCCA   GG UUUUCAAGUAAG CCAAAAA       U
AAGACUUUUCGGAAAAUAAAU^     UCC  U            G       GACGUUC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-2285-P3_5p*

mirBase accessionNone
Sequence
0- UAAAAGUUCAUUUGGGUUUUU -21
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Mature sequence

Bta-Mir-2285-P3_3p

mirBase accessionMIMAT0024586
Sequence
38- AAAACCGGAAUGAACUUUUUGG -60
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Proposed targets TargetScanVert: bta-miR-2285k