| MirGeneDB ID | Bta-Mir-2285-P1 |
|---|
| Family name |
MIR-2285 (all species) |
|---|
| Species |
Cow (Bos taurus) |
|---|
| MiRBase ID |
bta-mir-2285bm
|
|---|
| Paralogues |
Bta-Mir-2285-P2
Bta-Mir-2285-P3
Bta-Mir-2285-P4
Bta-Mir-2285-P5
Bta-Mir-2285-P6
Bta-Mir-2285-P7
Bta-Mir-2285-P8
Bta-Mir-2285-P9
Bta-Mir-2285-P10
Bta-Mir-2285-P11
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
B. taurus
|
|---|
| Node of Origin (family) |
B. taurus
|
|---|
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037343.1: 19928659-19928716 [-]
UCSC
Ensembl
|
|---|
| Seed |
AAAAACC |
|---|
Precursor
(pre-Mir +30nt flank) |
UUUCUUCCUCUGCAUUUAUUGGGUUGGCCAAAAAGUUCAUUAGGGUUUUUCUGUGAGAUGGGAUGGAAAAAACCGAGUGGACUUUUUGGCCAGCCCAUUGUACUCAGUGUGAGCCUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUUCUUCCUCUGCAUUUAU--| A G GUGAG
UGGGUUGGCCAAAAAGUUCAUU GG UUUUUCU A
ACCCGACCGGUUUUUCAGGUGA CC AAAAAGG U
UUUCCGAGUGUGACUCAUGUU^ G A UAGGG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | UGUG in loop |
|---|
Tissue expression
|
| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Bta-Mir-2285-P1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AAAAGUUCAUUAGGGUUUUUCU -22
Get sequence
|
|---|
| Mature sequence |
Bta-Mir-2285-P1_3p |
| mirBase accession | MIMAT0046624 |
|---|
| Sequence |
36- AAAAAACCGAGUGGACUUUUUG -58
Get sequence
|
|---|
