| MirGeneDB ID | Bta-Mir-2285-P11 |
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| Family name |
MIR-2285 (all species) |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-2284w
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| Paralogues |
Bta-Mir-2285-P1
Bta-Mir-2285-P2
Bta-Mir-2285-P3
Bta-Mir-2285-P4
Bta-Mir-2285-P5
Bta-Mir-2285-P6
Bta-Mir-2285-P7
Bta-Mir-2285-P8
Bta-Mir-2285-P9
Bta-Mir-2285-P10
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| Orthologues |
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| Node of Origin (locus) |
B. taurus
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| Node of Origin (family) |
B. taurus
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037357.1: 2800939-2800996 [+]
UCSC
Ensembl
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| Seed |
AAACCUC |
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Precursor
(pre-Mir +30nt flank) |
AAGAAAGACAUUUCAAUUAUUGGGUUGGCCAAGAGUUUGUUCGGGUUUCUCCAUAAGCUGUAUAGAAAAACCUCAAUGAACUCUUUGGCCAACCCAAUAUUUUGCUGCUUGUAUCACU
Get precursor sequence
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| Structure | 10 20 30 40 50
AAGAAAGACAUUUCAAU-- -| UG C C CAUAAG
UAUUGGGUUGGCC AAGAGUU UU GGGUUU UC \
AUAACCCAACCGG UUCUCAA AA UCCAAA AG C
UCACUAUGUUCGUCGUUUU U^ GU C A AUAUGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Yes
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Star sequence |
Bta-Mir-2285-P11_5p* |
| mirBase accession | MIMAT0017393 |
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| Sequence |
0- AAGAGUUUGUUCGGGUUUCUC -21
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-2284w
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| Mature sequence |
Bta-Mir-2285-P11_3p |
| mirBase accession | None |
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| Sequence |
36- AAAACCUCAAUGAACUCUUUGG -58
Get sequence
|
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