MirGeneDB 2.1

MirGeneDB ID

Bla-Mir-4863

Family name MIR-4863 (all species)
Seed GGGCCAU
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues
Orthologues Bfl-Mir-4863 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Branchiostoma
Genome context
(BraLan2)
Sc0000547: 17835-17895 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAGAUGUGAUGACACCUUGCCUGGCCAUGCAGACAACAUCAGAAUGUCCCUACGGGUUGGUUAGGUAGUAGGGCCAUUUUGUGUUGUCAGCAGGACCAGUGCACUUCACUUCGAGGACCCU
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Structure
        10         20          30        40        50        60
GAGAUGUGAUGACACCU-   -    -| A   A       U       U      GGGUUG 
                  UGC CUGG CC UGC GACAACA CAGAAUG CCCUAC      G
                  ACG GACC GG ACG CUGUUGU GUUUUAC GGGAUG      U
UCCCAGGAGCUUCACUUC   U    A^ -   A       -       C      AUGGAU 
 .       110       100         90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Em Em Em Em
Star sequence

Bla-Mir-4863_5p*

mirBase accessionNone
Sequence
0- AGACAACAUCAGAAUGUCCCUAC -23
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Mature sequence

Bla-Mir-4863_3p

mirBase accessionNone
Sequence
39- AGGGCCAUUUUGUGUUGUCAGC -61
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