MirGeneDB 2.1

MirGeneDB ID

Bla-Mir-2072

Family name MIR-2072 (all species)
Seed GCAACAU
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues
Orthologues Bfl-Mir-2072 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Branchiostoma
Genome context
(BraLan2)
Sc0000547: 18221-18276 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGUCUUGCCUAGAAGAGGGCCUUGUCUUGCUGCAACAUCACAGUGACCACAUAGGAGAGUCAAUGUGAGCACUGCGAUGUGGUAUUAAGAUCUGGCCAUGCCACACAGUUAAUCAG
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Structure
        10          20        30        40        50       
UGUCUUGCCUAGAAGAG--|   UU      C   A     A     AC     AGGA 
                   GGCC  GUCUUG UGC ACAUC CAGUG  CACAU    G
                   CCGG  UAGAAU AUG UGUAG GUCAC  GUGUA    A
GACUAAUUGACACACCGUA^   UC      U   G     C     GA     ACUG 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ad Ad Em Em Em Em
Mature sequence

Bla-Mir-2072_5p

mirBase accessionNone
Sequence
0- UGCAACAUCACAGUGACCACAU -22
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Star sequence

Bla-Mir-2072_3p*

mirBase accessionNone
Sequence
34- GUGAGCACUGCGAUGUGGUAUU -56
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