MirGeneDB 3.0
MirGeneDB ID

Bla-Mir-4862

Family name MIR-4862 (all species)
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues
Orthologues Bfl-Mir-4862 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Branchiostoma
Genome context
(BraLan2)		 Sc0000022: 2101100-2101158 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-4862)		 Mir-4869 Sc0000022: 2099011-2099075 [+] Ensembl
Mir-4857 Sc0000022: 2100339-2100402 [+] Ensembl
Mir-4862 Sc0000022: 2101100-2101158 [+] Ensembl
Seed CGCGUUU
Precursor
(pre-Mir +30nt flank)		 
GUAUUUGGAGUCAUUAUCGUUGUCCUGAUCACGCGUUUAUGUCUGCGCCUGUUGUAAAGUUGGAUACAGGUACAGAUGUGAACACGAGAUUGUGACAUUCUCUAACUACGUCCAGCGUU
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Structure
        10        20          30        40        50         
GUAUUUGGAGUCAUUAUCGU--|   C     A  C           CG     UGUAAA 
                      UGUC UGAUC CG GUUUAUGUCUG  CCUGU      \
                      ACAG GUUAG GC CAAGUGUAGAC  GGACA      G
UUGCGACCUGCAUCAAUCUCUU^   U     A  A           AU     UAGGUU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Ad Ad Em Em Em Em
Mature sequence

Bla-Mir-4862_5p
mirBase accessionNone
Sequence 
0- ACGCGUUUAUGUCUGCGCCUGU -22
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Star sequence

Bla-Mir-4862_3p*
mirBase accessionNone
Sequence 
37- AGGUACAGAUGUGAACACGAGA -59
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