MirGeneDB 2.1
MirGeneDB ID

Bfl-Mir-4866

Family name MIR-4866 (all species)
Seed CACACUU
Species Florida lancelet (Branchiostoma floridae)
MiRBase ID bfl-mir-4866
Paralogues
Orthologues Bla-Mir-4866 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Branchiostoma
Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic)		 NC_049983.1: 19807631-19807687 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-4866)		 Mir-29-P2 NC_049983.1: 19807093-19807152 [+] UCSC
Mir-4866 NC_049983.1: 19807631-19807687 [+] UCSC
Precursor
(pre-Mir +30nt flank)
UGCAUGUCUACAGUGCUAGACCUGUACCCAUCACACUUGUACUUCUUAGCAUGUGGUACAGGGAUGCUCAGCAGUGCAAGUGUGACAGGUAUGGUGUUUCCUUCUCUACUGGACGGU
Get precursor sequence
Structure
        10         20         30        40        50        
UGCAUGUCUACAGUGCU-    -|      CA             U  U     GUGGU 
                  AGAC CUGUACC  UCACACUUGUACU CU AGCAU     \
                  UUUG GGUAUGG  AGUGUGAACGUGA GA UCGUA     A
UGGCAGGUCAUCUCUUCC    U^      AC             C  C     GGGAC 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
To
Mature sequence

Bfl-Mir-4866_5p
mirBase accessionMIMAT0020101
Sequence 
0- UCACACUUGUACUUCUUAGCAU -22
Get sequence
Star sequence

Bfl-Mir-4866_3p*
mirBase accessionMIMAT0020102
Sequence 
35- GCUCAGCAGUGCAAGUGUGACA -57
Get sequence