MirGeneDB 3.0
MirGeneDB ID

Agr-Mir-12590

Family name MIR-12590 (all species)
Species West Indian fuzzy chiton (Acanthopleura granulata )
MiRBase ID
Paralogues
Orthologues Eba-Mir-12590  Mom-Mir-12590  War-Mir-12590-P1a  War-Mir-12590-P1b 
Node of Origin (locus) Aculifera
Node of Origin (family) Aculifera
Genome context
(GCA_016165875.1_ASM1616587v1_Acanthopleura_granulata)		 JABBOT010000003.1: 199026-199084 [+] Ensembl
Seed CUGGCGG
Precursor
(pre-Mir +30nt flank)		 
AGUCGAGAGAGAGAAAGGCGGUGUGCCUGCCCCUUCCUCCGCCCGUUAGAUGGCUGUAUUUAAUCCUUCUGGCGGGCGAAGAAAGAGGCCGGGAACCGAUCAAAUCCGACAUCUUCCCA
Get precursor sequence
Structure
        10           20        30        40        50         
AGUCGAGAGAGAGAAAGG---|   GUG  U   C   C  C           U GCUGUA 
                     CGGU   CC GCC CUU CU CGCCCGUUAGA G      \
                     GCCA   GG CGG GAA GA GCGGGCGGUCU C      U
ACCCUUCUACAGCCUAAACUA^   AG-  C   A   A  A           U CUAAUU 
       110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Agr-Mir-12590_5p*
mirBase accessionNone
Sequence 
0- CCCUUCCUCCGCCCGUUAGAUG -22
Get sequence
Mature sequence

Agr-Mir-12590_3p
mirBase accessionNone
Sequence 
37- UCUGGCGGGCGAAGAAAGAGGC -59
Get sequence