MirGeneDB 3.0

5 Ciona intestinalis microRNA genes with seed AAGUGCA (all species)

						Sort by genome coordinates								Motifs			Tissue expression - +
MirGeneDB ID ▲	MiRBase ID	Family	Seed	5p accession	3p accession	Chromosome	Start	End	Strand	Node of origin (locus)	Node of origin (family)	Iso­miR	3' NTU	UG	UGUG	CNNC	C-	C-	C-	C-	C-	C-	C-	C-	C-	C-	Ga	La	La
Cin-Mir-4017-P1	cin-mir-4033	MIR-4017	AAGUGCA	MIMAT0016555	MIMAT0016556	HT000042.1	67380	67435	+	C. intestinalis	C. intestinalis		No			1
Cin-Mir-4017-P2a	cin-mir-4017-1	MIR-4017	AAGUGCA	MIMAT0016524	MIMAT0016525	HT000042.1	68643	68699	+	C. intestinalis	C. intestinalis		No		1	1
Cin-Mir-4017-P2b	cin-mir-4017-2	MIR-4017	AAGUGCA	MIMAT0016524	MIMAT0016525	HT000042.1	68643	68699	+	C. intestinalis	C. intestinalis		No		1	1
Cin-Mir-4029	cin-mir-4029	MIR-4029	AAGUGCA	MIMAT0016547	MIMAT0016548	14	3195082	3195137	-	C. intestinalis	C. intestinalis		No			1
Cin-Mir-4030	cin-mir-4030	MIR-4030	AAGUGCA	MIMAT0016549	MIMAT0016550	3	4477480	4477534	-	C. intestinalis	C. intestinalis		No			1

(red - mature/co-mature, blue - star)

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