MirGeneDB 3.0

4 Alligator mississippiensis microRNA genes with seed AGCACCA (all species)
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC To
Ami-Mir-29-P2d ami-mir-29a-2 MIR-29 AGCACCA MIMAT0038073 MIMAT0038072 NW_017713418.1 1061842 1061901 + Gnathostomata Bilateria No 1
Ami-Mir-29-P2b ami-mir-29a-1 MIR-29 AGCACCA MIMAT0038071 MIMAT0038072 NW_017709854.1 24295656 24295715 - Gnathostomata Bilateria No 1
Ami-Mir-29-P1d V ami-mir-29b-2 MIR-29 AGCACCA MIMAT0038076 MIMAT0038075 NW_017713418.1 1060963 1061027 + Gnathostomata Bilateria 2 No 1
Ami-Mir-29-P1b V ami-mir-29b-1 MIR-29 AGCACCA MIMAT0038074 MIMAT0038075 NW_017709854.1 24298584 24298647 - Gnathostomata Bilateria 2 No 1

(red - mature/co-mature, blue - star)

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