MirGeneDB

Gene name

Bge-Mir-10-P1-v2

Family name MIR-10 (all species)
MiRBase ID
Paralogues Bge-Mir-10-P1-v1  Bge-Mir-10-P2  Bge-Mir-10-P3  Bge-Mir-10-P4 
Orthologues Aae-Mir-10-P1-v1  Aae-Mir-10-P1-v2  Aca-Mir-10-P1a-v1  Aca-Mir-10-P1a-v2  Aca-Mir-10-P1b-v1  Aca-Mir-10-P1b-v2  Aca-Mir-10-P1c-v1  Aca-Mir-10-P1c-v2  Ami-Mir-10-P1a-v1  Ami-Mir-10-P1a-v2  Ami-Mir-10-P1b-v1  Ami-Mir-10-P1b-v2  Ami-Mir-10-P1c-v1  Ami-Mir-10-P1c-v2  Asu-Mir-10-P1  Bfl-Mir-10-P1-v1  Bfl-Mir-10-P1-v2  Bta-Mir-10-P1a-v1  Bta-Mir-10-P1a-v2  Bta-Mir-10-P1b-v1  Bta-Mir-10-P1b-v2  Cbr-Mir-10-P1  Cel-Mir-10-P1  Cfa-Mir-10-P1a-v1  Cfa-Mir-10-P1a-v2  Cfa-Mir-10-P1b-v1  Cfa-Mir-10-P1b-v2  Cgi-Mir-10-P1  Cli-Mir-10-P1a-v1  Cli-Mir-10-P1a-v2  Cli-Mir-10-P1b-v1  Cli-Mir-10-P1b-v2  Cli-Mir-10-P1c-v1  Cli-Mir-10-P1c-v2  Cpi-Mir-10-P1a-v1  Cpi-Mir-10-P1a-v2  Cpi-Mir-10-P1b-v1  Cpi-Mir-10-P1b-v2  Cpi-Mir-10-P1c-v1  Cpi-Mir-10-P1c-v2  Cpo-Mir-10-P1a-v1  Cpo-Mir-10-P1a-v2  Cpo-Mir-10-P1b-v1  Cpo-Mir-10-P1b-v2  Cte-Mir-10-P1  Dan-Mir-10-P1-v1  Dme-Mir-10-P1-v1  Dmo-Mir-10-P1-v1  Dno-Mir-10-P1a-v1  Dno-Mir-10-P1a-v2  Dno-Mir-10-P1b-v1  Dno-Mir-10-P1b-v2  Dpu-Mir-10-P1-v1  Dpu-Mir-10-P1-v2  Dre-Mir-10-P1a1-v1  Dre-Mir-10-P1a1-v2  Dre-Mir-10-P1a2-v1  Dre-Mir-10-P1a2-v2  Dre-Mir-10-P1b1-v1  Dre-Mir-10-P1b1-v2  Dre-Mir-10-P1b2-v1  Dre-Mir-10-P1b2-v2  Dre-Mir-10-P1c-v1  Dre-Mir-10-P1c-v2  Efe-Mir-10-P1e  Efe-Mir-10-P1f  Ete-Mir-10-P1a-v1  Ete-Mir-10-P1a-v2  Ete-Mir-10-P1b-v1  Ete-Mir-10-P1b-v2  Gga-Mir-10-P1a-v1  Gga-Mir-10-P1a-v2  Gga-Mir-10-P1b-v1  Gga-Mir-10-P1b-v2  Hme-Mir-10-P1-v1  Hme-Mir-10-P1-v2  Hsa-Mir-10-P1a-v1  Hsa-Mir-10-P1a-v2  Hsa-Mir-10-P1b-v1  Hsa-Mir-10-P1b-v2  Isc-Mir-10-P1-v1  Isc-Mir-10-P1-v2  Lan-Mir-10-P1g  Lan-Mir-10-P1h  Lgi-Mir-10-P1  Mdo-Mir-10-P1a-v1  Mdo-Mir-10-P1a-v2  Mdo-Mir-10-P1b-v1  Mdo-Mir-10-P1b-v2  Mml-Mir-10-P1a-v1  Mml-Mir-10-P1a-v2  Mml-Mir-10-P1b-v1  Mml-Mir-10-P1b-v2  Mmu-Mir-10-P1a-v1  Mmu-Mir-10-P1a-v2  Mmu-Mir-10-P1b-v1  Mmu-Mir-10-P1b-v2  Ocu-Mir-10-P1a-v1  Ocu-Mir-10-P1a-v2  Ocu-Mir-10-P1b-v1  Ocu-Mir-10-P1b-v2  Pfl-Mir-10-P1  Pmi-Mir-10-P1  Rno-Mir-10-P1a-v1  Rno-Mir-10-P1a-v2  Rno-Mir-10-P1b-v1  Rno-Mir-10-P1b-v2  Sha-Mir-10-P1a-v1  Sha-Mir-10-P1a-v2  Sha-Mir-10-P1b-v1  Sha-Mir-10-P1b-v2  Sko-Mir-10-P1  Spu-Mir-10-P1  Tca-Mir-10-P1-v1  Tca-Mir-10-P1-v2  Tgu-Mir-10-P1a-v1  Tgu-Mir-10-P1a-v2  Tgu-Mir-10-P1b-v1  Tgu-Mir-10-P1b-v2  Xtr-Mir-10-P1a-v1  Xtr-Mir-10-P1a-v2  Xtr-Mir-10-P1b-v1  Xtr-Mir-10-P1b-v2  Xtr-Mir-10-P1c-v1  Xtr-Mir-10-P1c-v2 
Node of Origin (gene) Arthropoda
Node of Origin (family) Eumetazoa
Genome context
(Bger_2.0)
KZ614729.1: 496541-496600 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUCACCAGCACAGAAGUAAUGCUCUACAUCUACCCUGUAGAUCCGAAUUUGUUUGACAUUGGGCGACAAAUUCGGUUCUAGAGAGGUUUGUGUGGUGCAUACAAUGCAACGUGCAACCAA
Get precursor sequence
Structure
        10          20        30         40        50         
GUCACCAGCACAGAAGUA--    U      CU   -| G    U          UUGACA 
                    AUGC CUACAU  ACC CU UAGA CCGAAUUUGU      \
                    UACG GGUGUG  UGG GA AUCU GGCUUAAACA      U
AACCAACGUGCAACGUAACA    U      UU   A^ G    U          GCGGGU 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Mature sequence

Bge-Mir-10-P1-v2_5p

MirBase accessionNone
Sequence
0- UACCCUGUAGAUCCGAAUUUGU -22
Get sequence
Seed sequenceACCCUGU
Star sequence

Bge-Mir-10-P1-v2_3p*

MirBase accessionNone
Sequence
37- AAAUUCGGUUCUAGAGAGGUUUG -60
Get sequence