MirGeneDB 2.1

MirGeneDB ID

Dme-Mir-10-P1

Family name MIR-10 (all species)
Seed CCCUGUA
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-10
Paralogues Dme-Mir-10-P2  Dme-Mir-10-P3  Dme-Mir-10-P4 
Orthologues Aae-Mir-10-P1-v1  Aae-Mir-10-P1-v2  Aca-Mir-10-P1b-v1  Aca-Mir-10-P1b-v2  Aca-Mir-10-P1c-v1  Aca-Mir-10-P1c-v2  Aca-Mir-10-P1d-v1  Aca-Mir-10-P1d-v2  Ami-Mir-10-P1b-v1  Ami-Mir-10-P1b-v2  Ami-Mir-10-P1c-v1  Ami-Mir-10-P1c-v2  Ami-Mir-10-P1d-v1  Ami-Mir-10-P1d-v2  Asu-Mir-10-P1  Bfl-Mir-10-P1-v1  Bfl-Mir-10-P1-v2  Bge-Mir-10-P1-v1  Bge-Mir-10-P1-v2  Bla-Mir-10-P1-v1  Bla-Mir-10-P1-v2  Bta-Mir-10-P1b-v1  Bta-Mir-10-P1b-v2  Bta-Mir-10-P1c-v1  Bta-Mir-10-P1c-v2  Cbr-Mir-10-P1  Cel-Mir-10-P1  Cfa-Mir-10-P1b-v1  Cfa-Mir-10-P1b-v2  Cfa-Mir-10-P1c-v1  Cfa-Mir-10-P1c-v2  Cgi-Mir-10-P1  Cli-Mir-10-P1b-v1  Cli-Mir-10-P1b-v2  Cli-Mir-10-P1c-v1  Cli-Mir-10-P1c-v2  Cli-Mir-10-P1d-v1  Cli-Mir-10-P1d-v2  Cmi-Mir-10-P1b-v1  Cmi-Mir-10-P1b-v2  Cmi-Mir-10-P1c-v1  Cmi-Mir-10-P1c-v2  Cmi-Mir-10-P1d-v1  Cmi-Mir-10-P1d-v2  Cpi-Mir-10-P1b-v1  Cpi-Mir-10-P1b-v2  Cpi-Mir-10-P1c-v1  Cpi-Mir-10-P1c-v2  Cpi-Mir-10-P1d-v1  Cpi-Mir-10-P1d-v2  Cpo-Mir-10-P1b-v1  Cpo-Mir-10-P1b-v2  Cpo-Mir-10-P1c-v1  Cpo-Mir-10-P1c-v2  Csc-Mir-10-P1q1  Csc-Mir-10-P1q2  Csc-Mir-10-P1q3  Csc-Mir-10-P1r  Cte-Mir-10-P1  Dan-Mir-10-P1  Dma-Mir-10-P1-v1  Dma-Mir-10-P1-v2  Dmo-Mir-10-P1  Dno-Mir-10-P1b-v1  Dno-Mir-10-P1b-v2  Dno-Mir-10-P1c-v1  Dno-Mir-10-P1c-v2  Dpu-Mir-10-P1-v1  Dpu-Mir-10-P1-v2  Dre-Mir-10-P1b1-v1  Dre-Mir-10-P1b1-v2  Dre-Mir-10-P1b2-v1  Dre-Mir-10-P1b2-v2  Dre-Mir-10-P1c1-v1  Dre-Mir-10-P1c1-v2  Dre-Mir-10-P1c2-v1  Dre-Mir-10-P1c2-v2  Dre-Mir-10-P1d1-v1  Dre-Mir-10-P1d1-v2  Dsi-Mir-10-P1  Dya-Mir-10-P1  Ebu-Mir-10-P1e  Ebu-Mir-10-P1f  Efe-Mir-10-P1i  Efe-Mir-10-P1j  Ete-Mir-10-P1b-v1  Ete-Mir-10-P1b-v2  Ete-Mir-10-P1c-v1  Ete-Mir-10-P1c-v2  Gga-Mir-10-P1b-v1  Gga-Mir-10-P1b-v2  Gga-Mir-10-P1c-v1  Gga-Mir-10-P1c-v2  Gga-Mir-10-P1d-v1  Gga-Mir-10-P1d-v2  Gja-Mir-10-P1b-v1  Gja-Mir-10-P1b-v2  Gja-Mir-10-P1c-v1  Gja-Mir-10-P1c-v2  Gja-Mir-10-P1d-v1  Gja-Mir-10-P1d-v2  Gmo-Mir-10-P1b1-v1  Gmo-Mir-10-P1b1-v2  Gmo-Mir-10-P1b2-v1  Gmo-Mir-10-P1b2-v2  Gmo-Mir-10-P1c1-v1  Gmo-Mir-10-P1c1-v2  Gmo-Mir-10-P1c2-v1  Gmo-Mir-10-P1c2-v2  Gmo-Mir-10-P1d1-v1  Gmo-Mir-10-P1d1-v2  Hme-Mir-10-P1-v1  Hme-Mir-10-P1-v2  Hsa-Mir-10-P1b-v1  Hsa-Mir-10-P1b-v2  Hsa-Mir-10-P1c-v1  Hsa-Mir-10-P1c-v2  Isc-Mir-10-P1-v1  Isc-Mir-10-P1-v2  Lan-Mir-10-P1g  Lan-Mir-10-P1h  Lch-Mir-10-P1b  Lch-Mir-10-P1c  Lch-Mir-10-P1d  Lgi-Mir-10-P1  Loc-Mir-10-P1b-v1  Loc-Mir-10-P1b-v2  Loc-Mir-10-P1c-v1  Loc-Mir-10-P1c-v2  Loc-Mir-10-P1d-v1  Loc-Mir-10-P1d-v2  Lpo-Mir-10-P1k-v1  Lpo-Mir-10-P1k-v2  Lpo-Mir-10-P1l-v1  Lpo-Mir-10-P1l-v2  Lpo-Mir-10-P1m-v1  Lpo-Mir-10-P1m-v2  Lpo-Mir-10-P1n-v1  Lpo-Mir-10-P1n-v2  Lpo-Mir-10-P1o-v1  Lpo-Mir-10-P1o-v2  Lpo-Mir-10-P1p-v1  Lpo-Mir-10-P1p-v2  Mal-Mir-10-P1b1-v1  Mal-Mir-10-P1b1-v2  Mal-Mir-10-P1b2  Mal-Mir-10-P1c1-v1  Mal-Mir-10-P1c1-v2  Mal-Mir-10-P1c2a-v1  Mal-Mir-10-P1c2a-v2  Mal-Mir-10-P1c2b-v1  Mal-Mir-10-P1c2b-v2  Mal-Mir-10-P1d1-v1  Mal-Mir-10-P1d1-v2  Mdo-Mir-10-P1b-v1  Mdo-Mir-10-P1b-v2  Mdo-Mir-10-P1c-v1  Mdo-Mir-10-P1c-v2  Mml-Mir-10-P1b-v1  Mml-Mir-10-P1b-v2  Mml-Mir-10-P1c-v1  Mml-Mir-10-P1c-v2  Mmu-Mir-10-P1b-v1  Mmu-Mir-10-P1b-v2  Mmu-Mir-10-P1c-v1  Mmu-Mir-10-P1c-v2  Mun-Mir-10-P1b-v1  Mun-Mir-10-P1b-v2  Mun-Mir-10-P1c-v1  Mun-Mir-10-P1c-v2  Mun-Mir-10-P1d-v1  Mun-Mir-10-P1d-v2  Npo-Mir-10-P1  Nve-Mir-10  Oan-Mir-10-P1b-v1  Oan-Mir-10-P1b-v2  Oan-Mir-10-P1c-v1  Oan-Mir-10-P1c-v2  Ocu-Mir-10-P1b-v1  Ocu-Mir-10-P1b-v2  Ocu-Mir-10-P1c-v1  Ocu-Mir-10-P1c-v2  Pbv-Mir-10-P1b-v1  Pbv-Mir-10-P1b-v2  Pbv-Mir-10-P1c-v1  Pbv-Mir-10-P1c-v2  Pbv-Mir-10-P1d-v1  Pbv-Mir-10-P1d-v2  Pfl-Mir-10-P1  Pma-Mir-10-P1o1  Pma-Mir-10-P1o2  Pmi-Mir-10-P1  Rno-Mir-10-P1b-v1  Rno-Mir-10-P1b-v2  Rno-Mir-10-P1c-v1  Rno-Mir-10-P1c-v2  Sha-Mir-10-P1b-v1  Sha-Mir-10-P1b-v2  Sha-Mir-10-P1c-v1  Sha-Mir-10-P1c-v2  Sko-Mir-10-P1  Sme-Mir-10-P1s  Sme-Mir-10-P1t  Spt-Mir-10-P1b  Spt-Mir-10-P1c  Spu-Mir-10-P1  Sto-Mir-10-P1b-v1  Sto-Mir-10-P1b-v2  Sto-Mir-10-P1c-v1  Sto-Mir-10-P1c-v2  Tca-Mir-10-P1-v1  Tca-Mir-10-P1-v2  Tgu-Mir-10-P1b-v1  Tgu-Mir-10-P1b-v2  Tgu-Mir-10-P1c-v1  Tgu-Mir-10-P1c-v2  Tni-Mir-10-P1b1-v1  Tni-Mir-10-P1b1-v2  Tni-Mir-10-P1b2  Tni-Mir-10-P1c1-v1  Tni-Mir-10-P1c1-v2  Tni-Mir-10-P1c2-v1  Tni-Mir-10-P1c2-v2  Tni-Mir-10-P1d1-v1  Tni-Mir-10-P1d1-v2  Xla-Mir-10-P1b3-v1  Xla-Mir-10-P1b3-v2  Xla-Mir-10-P1b4-v1  Xla-Mir-10-P1b4-v2  Xla-Mir-10-P1c3-v1  Xla-Mir-10-P1c3-v2  Xla-Mir-10-P1c4-v1  Xla-Mir-10-P1c4-v2  Xla-Mir-10-P1d3-v1  Xla-Mir-10-P1d3-v2  Xla-Mir-10-P1d4-v1  Xla-Mir-10-P1d4-v2  Xtr-Mir-10-P1b-v1  Xtr-Mir-10-P1b-v2  Xtr-Mir-10-P1c-v1  Xtr-Mir-10-P1c-v2  Xtr-Mir-10-P1d-v1  Xtr-Mir-10-P1d-v2 
Node of Origin (locus) Bilateria
Node of Origin (family) Eumetazoa
Genome context
(Drosophila_melanogaster_BDGP6)
3R: 6809512-6809574 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-10-P1)
Mir-10-P4 3R: 6776348-6776439 [+] UCSC Ensembl
Mir-10-P1 3R: 6809512-6809574 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACUGUUCCUCAUCAGUUUGCUCCACGUCUACCCUGUAGAUCCGAAUUUGUUUUAUACUAGCUUUAAGGACAAAUUCGGUUCUAGAGAGGUUUGUGUGGUUCAAUAUCCAUCGAAAAAGUGUU
Get precursor sequence
Structure
        10          20        30         40        50        60
GACUGUUCCUCAUCAGU--   CU     UCU   -| G    U           UUAUACU 
                   UUG  CCACG   ACC CU UAGA CCGAAUUUGUU       A
                   AAC  GGUGU   UGG GA AUCU GGCUUAAACAG       G
UUGUGAAAAAGCUACCUAU   UU     GUU   A^ G    U           GAAUUUC 
 120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo He L3 Fe Fe La Wh
Mature sequence

Dme-Mir-10-P1_5p

mirBase accessionMIMAT0000115
Sequence
0- ACCCUGUAGAUCCGAAUUUGUU -22
Get sequence
Proposed targets microrna.org: MIMAT0000115
Co-mature sequence

Dme-Mir-10-P1_3p

mirBase accessionMIMAT0012531
Sequence
40- CAAAUUCGGUUCUAGAGAGGUUU -63
Get sequence
Proposed targets microrna.org: MIMAT0012531