MirGeneDB 2.1

61 microRNA genes with node of origin B. taurus
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Bta-Mir-29-P1d7-v1 bta-mir-29b-2 MIR-29 AGCACCA None MIMAT0003828 NC_037343.1 75660383 75660447 + B. taurus Bilateria No 1
Bta-Mir-29-P1d7-v2 bta-mir-29b-2 MIR-29 UAGCACC None MIMAT0003828 NC_037343.1 75660384 75660446 + B. taurus Bilateria No 1
Bta-Mir-29-P1d8-v1 bta-mir-29b-2 MIR-29 AGCACCA None MIMAT0003828 NC_037343.1 75577055 75577119 + B. taurus Bilateria No 1
Bta-Mir-29-P1d8-v2 bta-mir-29b-2 MIR-29 UAGCACC None MIMAT0003828 NC_037343.1 75577056 75577118 + B. taurus Bilateria No 1
Bta-Mir-29-P2d1 bta-mir-29c MIR-29 AGCACCA None MIMAT0003829 NC_037343.1 75660930 75660987 + B. taurus Bilateria No 1
Bta-Mir-29-P2d2 bta-mir-29d MIR-29 AGCACCA MIMAT0026919 MIMAT0009275 NC_037343.1 75577623 75577680 + B. taurus Bilateria No 1
Bta-Mir-154-P3c bta-mir-323b MIR-154 ACAAUAC None MIMAT0040935 NC_037348.1 65955040 65955095 + B. taurus Eutheria No 1 1
Bta-Mir-154-P37 bta-mir-411b MIR-154 GGUCGAC MIMAT0025541 None NC_037348.1 65915604 65915659 + B. taurus Eutheria No 1 1
Bta-Mir-320-P1a bta-mir-320a-1 MIR-320 AAAGCUG None MIMAT0003534 NC_037347.1 15245811 15245864 + B. taurus Eutheria No
Bta-Mir-320-P1b bta-mir-320a-2 MIR-320 AAAGCUG None MIMAT0003534 NC_037335.1 69558101 69558154 - B. taurus Eutheria No
Bta-Mir-362-P2-v3 bta-mir-502b MIR-362 CCACCUG None MIMAT0009339 NC_037357.1 87736191 87736252 + B. taurus Eutheria No 1
Bta-Mir-506-P2f None MIR-506 ACUUCAG None None NC_037357.1 29994643 29994700 - B. taurus Eutheria Unknown 1 1 1
Bta-Mir-506-P2g None MIR-506 ACUUCAG None None NC_037357.1 29998359 29998416 - B. taurus Eutheria Unknown 1 1 1
Bta-Mir-506-P2h None MIR-506 ACCCCAA None None NC_037357.1 30020600 30020657 - B. taurus Eutheria Unknown
Bta-Mir-2285-P1 bta-mir-2285bm MIR-2285 AAAAACC None MIMAT0046624 NC_037343.1 19928659 19928716 - B. taurus B. taurus Yes 1
Bta-Mir-2285-P2 bta-mir-2285bf-1 MIR-2285 AAACGUU None MIMAT0046382 NC_037333.1 92907304 92907363 + B. taurus B. taurus Yes
Bta-Mir-2285-P3 bta-mir-2285k-3 MIR-2285 AAACCGG None MIMAT0024586 NC_037328.1 80280624 80280683 - B. taurus B. taurus Yes
Bta-Mir-2285-P4 bta-mir-2285ac MIR-2285 GAAAGUU None MIMAT0030440 NC_037338.1 4553412 4553471 - B. taurus B. taurus Yes
Bta-Mir-2285-P5 bta-mir-2284z-2 MIR-2285 AAAAAGU MIMAT0025559 None NC_037338.1 21349237 21349294 - B. taurus B. taurus Yes
Bta-Mir-2285-P6 None MIR-2285 AAAAGCU None None NC_037346.1 50906938 50906997 - B. taurus B. taurus Yes 1
Bta-Mir-2285-P7 bta-mir-2285aa MIR-2285 AAAAAGU None MIMAT0030435 NC_037329.1 5273102 5273163 + B. taurus B. taurus Yes 1
Bta-Mir-2285-P8 bta-mir-2285k-5 MIR-2285 AAACCGG None MIMAT0024586 NC_037330.1 53401653 53401712 - B. taurus B. taurus Yes 1
Bta-Mir-2285-P9 None MIR-2285 AACUCGA None None NC_037332.1 67851823 67851882 + B. taurus B. taurus Yes 1
Bta-Mir-2285-P10 None MIR-2285 AAACCUG None None NC_037333.1 46328888 46328946 + B. taurus B. taurus Yes
Bta-Mir-2285-P11 bta-mir-2284w MIR-2285 AAACCUC MIMAT0017393 None NC_037357.1 2800939 2800996 + B. taurus B. taurus Yes 1
Bta-Mir-2299 bta-mir-2299 MIR-2299 CUGGAUU MIMAT0011807 MIMAT0011808 NC_037339.1 29635277 29635335 - B. taurus B. taurus Yes 1 1
Bta-Mir-2313 bta-mir-2313 MIR-2313 GUGCAGC MIMAT0011829 MIMAT0011830 NC_037342.1 34091146 34091207 + B. taurus B. taurus Yes
Bta-Mir-2320 bta-mir-2320 MIR-2320 CGAUGAU MIMAT0011844 MIMAT0011845 NC_037343.1 49235913 49235974 + B. taurus B. taurus No 1
Bta-Mir-2328 bta-mir-2328 MIR-2328 CCCCCUC MIMAT0011857 MIMAT0011858 NC_037345.1 39215927 39215988 + B. taurus B. taurus Unknown 1 1
Bta-Mir-2330 bta-mir-2330 MIR-2330 GGGCUUG MIMAT0011861 MIMAT0011862 NC_037345.1 55830885 55830945 - B. taurus B. taurus No
Bta-Mir-2331 bta-mir-2331 MIR-2331 GCUUCCG MIMAT0011863 MIMAT0011864 NC_037346.1 14988935 14988999 + B. taurus B. taurus No 1
Bta-Mir-2336 bta-mir-2336 MIR-2336 UAACCGU None MIMAT0011869 NC_037346.1 22253986 22254043 + B. taurus B. taurus No 1
Bta-Mir-2367 bta-mir-2367 MIR-2367 CCCUGUA MIMAT0011909 MIMAT0011910 NC_037349.1 11368936 11368994 + B. taurus B. taurus No 1
Bta-Mir-2373 bta-mir-2373 MIR-2373 GAGCCCG MIMAT0011918 MIMAT0011919 NC_037349.1 56833157 56833213 + B. taurus B. taurus No 1
Bta-Mir-2382 bta-mir-2382 MIR-2382 GGGGAGU MIMAT0011930 MIMAT0011931 NC_037352.1 1742949 1743007 - B. taurus B. taurus Yes
Bta-Mir-2388 bta-mir-2388 MIR-2388 GCUCCCG MIMAT0011940 MIMAT0011941 NC_037352.1 34785323 34785381 - B. taurus B. taurus No 1
Bta-Mir-2408 bta-mir-2408 MIR-2408 ACGUGUG None MIMAT0011966 NC_037356.1 44875075 44875131 - B. taurus B. taurus Yes 1
Bta-Mir-2461 bta-mir-2461 MIR-2461 CACUCUG MIMAT0012047 MIMAT0012048 NC_037334.1 61885762 61885818 + B. taurus B. taurus No 1
Bta-Mir-2468 bta-mir-2468 MIR-2468 UAGGAAC MIMAT0012058 None NC_037335.1 5823342 5823402 + B. taurus B. taurus No
Bta-Mir-2471 bta-mir-2471 MIR-2471 AGGAUCU MIMAT0012061 MIMAT0012062 NC_037335.1 40311808 40311869 + B. taurus B. taurus No
Bta-Mir-2475 bta-mir-2475 MIR-2475 CUUCAGG None MIMAT0012066 NC_037335.1 81616377 81616437 + B. taurus B. taurus No
Bta-Mir-3431 bta-mir-3431 MIR-3431 CUCAGUC MIMAT0017394 None NC_037357.1 34445022 34445083 - B. taurus B. taurus No 1
Bta-Mir-3432 bta-mir-3432a-2 MIR-3432 GCGGGAU MIMAT0017396 None NC_037352.1 33897408 33897467 - B. taurus B. taurus No 1
Bta-Mir-3660 bta-mir-3660 MIR-3660 CUGACAG None MIMAT0025555 NC_037334.1 89558112 89558171 - B. taurus B. taurus No 1
Bta-Mir-3956-v1 bta-mir-3956 MIR-3956 UACGUGG MIMAT0025544 None NC_037348.1 65932749 65932833 + B. taurus B. taurus No
Bta-Mir-3956-v2 bta-mir-3956 MIR-3956 ACGUGGA MIMAT0025544 None NC_037348.1 65932750 65932832 + B. taurus B. taurus No
Bta-Mir-3957 bta-mir-3957 MIR-3957 CGCACAG MIMAT0025548 None NC_037348.1 65953387 65953445 + B. taurus B. taurus No 1
Bta-Mir-6119 bta-mir-6119 MIR-6119 GAGGUAA MIMAT0024588 MIMAT0024589 NC_037357.1 4150900 4150963 - B. taurus B. taurus No
Bta-Mir-6525 bta-mir-6525 MIR-6525 UGGGGAA MIMAT0025554 None NC_037331.1 113652717 113652776 - B. taurus B. taurus No
Bta-Mir-7858 bta-mir-7858 MIR-7858 AGGAUUU None MIMAT0030433 NC_037347.1 10263064 10263122 - B. taurus B. taurus No 1
Bta-Mir-7859 bta-mir-7859 MIR-7859 AAAACUG None MIMAT0030434 NC_037337.1 85267238 85267295 + B. taurus B. taurus No 1 1
Bta-Mir-7861-v1 bta-mir-7861 MIR-7861 CACUCAG None MIMAT0030441 NC_037340.1 13066646 13066703 - B. taurus B. taurus No
Bta-Mir-7861-v2 bta-mir-7861 MIR-7861 ACACUCA None MIMAT0030441 NC_037340.1 13066645 13066704 - B. taurus B. taurus Unknown 1 1
Bta-Mir-7862 bta-mir-7862 MIR-7862 ACAGCUC None MIMAT0030442 NC_037336.1 60574890 60574953 - B. taurus B. taurus No 1
Bta-Mir-10182 bta-mir-10182 MIR-10182 CGGCCCG MIMAT0040940 MIMAT0040941 NC_037328.1 74829785 74829844 + B. taurus B. taurus No 1
Bta-Mir-11968-P1 bta-mir-11986b MIR-11968 UUUCCAA MIMAT0046621 None NC_037347.1 10264042 10264099 - B. taurus B. taurus No
Bta-Mir-11968-P2 bta-mir-11986c MIR-11968 AACUGAG None MIMAT0046638 NC_037357.1 37488593 37488652 - B. taurus B. taurus No
Bta-Mir-11989 bta-mir-11989 MIR-11989 CCCAGGG MIMAT0046628 None NC_037337.1 20965616 20965670 + B. taurus B. taurus Unknown
Bta-Mir-11995 bta-mir-11995 MIR-11995 UAGCAGA MIMAT0046648 None NC_037348.1 2254585 2254643 + B. taurus B. taurus No 1
Bta-Novel-1 None BTA-NOVEL-1 UCUGAGA None None NC_037329.1 4721963 4722025 + B. taurus B. taurus No
Bta-Novel-2 None BTA-NOVEL-2 CUGGUGG None None NC_037355.1 33236705 33236762 - B. taurus B. taurus No

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all