MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-2285-P1

Family name MIR-2285 (all species)
Seed AAAAACC
Species Cow (Bos taurus)
MiRBase ID bta-mir-2285bm
Paralogues Bta-Mir-2285-P2  Bta-Mir-2285-P3  Bta-Mir-2285-P4  Bta-Mir-2285-P5  Bta-Mir-2285-P6  Bta-Mir-2285-P7  Bta-Mir-2285-P8  Bta-Mir-2285-P9  Bta-Mir-2285-P10  Bta-Mir-2285-P11 
Orthologues
Node of Origin (locus) B. taurus
Node of Origin (family) B. taurus
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037343.1: 19928659-19928716 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUCUUCCUCUGCAUUUAUUGGGUUGGCCAAAAAGUUCAUUAGGGUUUUUCUGUGAGAUGGGAUGGAAAAAACCGAGUGGACUUUUUGGCCAGCCCAUUGUACUCAGUGUGAGCCUUU
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Structure
        10          20        30        40        50        
UUUCUUCCUCUGCAUUUAU--|                     A  G       GUGAG 
                     UGGGUUGGCCAAAAAGUUCAUU GG UUUUUCU     A
                     ACCCGACCGGUUUUUCAGGUGA CC AAAAAGG     U
UUUCCGAGUGUGACUCAUGUU^                     G  A       UAGGG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsUGUG in loop
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-2285-P1_5p*

mirBase accessionNone
Sequence
0- AAAAGUUCAUUAGGGUUUUUCU -22
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Mature sequence

Bta-Mir-2285-P1_3p

mirBase accessionMIMAT0046624
Sequence
36- AAAAAACCGAGUGGACUUUUUG -58
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