MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-2285-P7

Family name MIR-2285 (all species)
Seed AAAAAGU
Species Cow (Bos taurus)
MiRBase ID bta-mir-2285aa
Paralogues Bta-Mir-2285-P1  Bta-Mir-2285-P2  Bta-Mir-2285-P3  Bta-Mir-2285-P4  Bta-Mir-2285-P5  Bta-Mir-2285-P6  Bta-Mir-2285-P8  Bta-Mir-2285-P9  Bta-Mir-2285-P10  Bta-Mir-2285-P11 
Orthologues
Node of Origin (locus) B. taurus
Node of Origin (family) B. taurus
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037329.1: 5273102-5273163 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCACGUGUGUGUCCAUAUAUUGAGUUGAACAAAAAGUUCGUCCAGAUUUUUCCAUAAGAUGUUACAGAAAAACUGGAACGAACUUUUGGGCCAACCCAAUAUAAUAAUCAGCCAUAAAAAA
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Structure
        10          20        30        40         50        60
UGCACGUGUGUGUCCAU--      A    AACA         -|    A     CCAUAAG 
                   AUAUUG GUUG    AAAAGUUCG UCCAG UUUUU       A
                   UAUAAC CAAC    UUUUCAAGC AGGUC AAAAA       U
AAAAAAUACCGACUAAUAA      C    CGGG         A^    -     GACAUUG 
120       110       100        90        80         70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-2285-P7_5p

mirBase accessionNone
Sequence
0- CAAAAAGUUCGUCCAGAUUUUU -22
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Star sequence

Bta-Mir-2285-P7_3p*

mirBase accessionMIMAT0030435
Sequence
39- AAAACUGGAACGAACUUUUGGGC -62
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Proposed targets TargetScanVert: bta-miR-2285aa