MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-12477-P1

Family name MIR-12477 (all species)
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-12477-P2 
Orthologues Mun-Mir-12477  Xtr-Mir-12477 
Node of Origin (locus) X. laevis
Node of Origin (family) Amphibia
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030733.1: 72634792-72634849 [+] UCSC Ensembl
Seed GAGGCUU
Precursor
(pre-Mir +30nt flank)		 
UCUCUCAGAAGAAUACCAUUGGAGAUGCAUUGAGGCUUCCUACUUCAAGGCUGUGUUCUGACUCAUCCUAGAAGCUUGAAGCCUAGCUGCAUCUUCAACAGAGACACACGGGAAUCUG
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Structure
        10          20        30        40        50        
UCUCUCAGAAGAAUACCA--|          UUG       CUA    A   C  UGUU 
                    UUGGAGAUGCA   AGGCUUC   CUUC AGG UG    C
                    AACUUCUACGU   UCCGAAG   GAAG UCC AC    U
GUCUAAGGGCACACAGAGAC^          CGA       UUC    A   U  UCAG 
      110       100        90        80        70        60
Deep sequencing
3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Em
Mature sequence

Xla-Mir-12477-P1_5p
mirBase accessionNone
Sequence 
0- UGAGGCUUCCUACUUCAAGGCUG -23
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Star sequence

Xla-Mir-12477-P1_3p*
mirBase accessionNone
Sequence 
35- UCCUAGAAGCUUGAAGCCUAGCU -58
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