| MirGeneDB ID | Tca-Mir-11634 |
|---|
| Family name |
MIR-11634 (all species) |
|---|
| Seed |
UUGGGAG |
|---|
| Species |
Red flour beetle (Tribolium castaneum) |
|---|
| MiRBase ID |
tca-mir-11634
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
T. castaneum
|
|---|
| Node of Origin (family) |
T. castaneum
|
|---|
Genome context
(Tcas5.2) |
LG8: 13297445-13297512 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CGCACCAAGGAGCGGCGGCUCCGAGGGGGCAUUGGGAGUUCAGGGCGCGGCUGUGACCUGCAGCCACUCGGAGAGGCCGCGCCCCGCACUCGCGAGGUCACUCGCCGCCUGAACCAGAUCAGAUCGGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CGCACCAAGGAGCGGCG---| UC GG A G UCA GUGACCUGCA
GC CGAG GGC UUG GAGU GGGCGCGGCU G
CG GCUC CUG AGC CUCA CCCGCGCCGG C
CGGCUAGACUAGACCAAGUC^ CC A- G G CGC AGAGGCUCAC
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UGUG in loop |
|---|
Tissue expression
|
| Ad |
Ea |
Em |
Em |
Em |
Em |
Em |
Fe |
Fe |
Fe |
Fe |
Oo |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Tca-Mir-11634_5p |
| mirBase accession | MIMAT0045588 |
|---|
| Sequence |
0- AUUGGGAGUUCAGGGCGCGGCU -22
Get sequence
|
|---|
| Star sequence |
Tca-Mir-11634_3p* |
| mirBase accession | MIMAT0045589 |
|---|
| Sequence |
46- CCGCGCCCCGCACUCGCGAGGU -68
Get sequence
|
|---|
