| MirGeneDB ID | Sha-Mir-7293 |
|---|
| Family name |
MIR-7293 (all species) |
|---|
| Species |
Tasmanian devil (Sarcophilus harrisii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Mdo-Mir-7293
Neu-Mir-7293
|
|---|
| Node of Origin (locus) |
Marsupialia
|
|---|
| Node of Origin (family) |
Marsupialia
|
|---|
Genome context
(DEVIL_add) |
GL841369.1: 68150-68206 [+]
UCSC
Ensembl
|
|---|
| Seed |
CGCUGGG |
|---|
Precursor
(pre-Mir +30nt flank) |
GGCUGCUGUUCAGAGUAGCAGGUGAUGGGCAGCAGAAAUGCCCCAGCUCCCAGUGGUAAUAGACAGGCGCUGGGGAAUUUCUGCCACCUGUCAGCUCUGCUUUCAGCGGCAGAAACU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGCUGCUGUUCAGAGUA---|C G CA G U CAGUGGU
G AG UGAUGGG GCAGAAAU CCCCAGC CC \
C UC ACUGUCC CGUCUUUA GGGGUCG GG A
UCAAAGACGGCGACUUUCGU^- G AC A C ACAGAUA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Sha-Mir-7293_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGCAGAAAUGCCCCAGCUCCC -21
Get sequence
|
|---|
| Mature sequence |
Sha-Mir-7293_3p |
| mirBase accession | None |
|---|
| Sequence |
36- GCGCUGGGGAAUUUCUGCCAC -57
Get sequence
|
|---|
