| MirGeneDB ID | Mdo-Mir-7293 |
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| Family name |
MIR-7293 (all species) |
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| Species |
Gray short-tailed opossum (Monodelphis domestica) |
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| MiRBase ID |
mdo-mir-7293
|
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| Paralogues |
|
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| Orthologues |
Neu-Mir-7293
Sha-Mir-7293
|
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| Node of Origin (locus) |
Marsupialia
|
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| Node of Origin (family) |
Marsupialia
|
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Genome context
(monDom5_add) |
3: 362140420-362140476 [+]
UCSC
Ensembl
|
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| Seed |
CGCUGGG |
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Precursor
(pre-Mir +30nt flank) |
GGCUGCUGUUCAGAGUAGCAGGUGAUGGGCAGCAGAAAUGCCCCAGCUCCCAGUGGUAAUAGACAGGCGCUGGGGAAUUUCUGCCACCUGUCAGCUCUGCUUUCAGCGGCAGAGCUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGCUGCUGUUCAGAGUA---|C G CA G U CAGUGGU
G AG UGAUGGG GCAGAAAU CCCCAGC CC \
C UC ACUGUCC CGUCUUUA GGGGUCG GG A
AUCGAGACGGCGACUUUCGU^- G AC A C ACAGAUA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Mdo-Mir-7293_5p* |
| mirBase accession | MIMAT0028570 |
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| Sequence |
0- AGCAGAAAUGCCCCAGCUCCC -21
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7293-5p
|
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| Mature sequence |
Mdo-Mir-7293_3p |
| mirBase accession | MIMAT0028571 |
|---|
| Sequence |
36- GCGCUGGGGAAUUUCUGCCAC -57
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7293-3p
|
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