| MirGeneDB ID | Pfl-Mir-4819 |
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| Family name |
MIR-4819 (all species) |
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| Species |
Ptychodera (Ptychodera flava) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Sko-Mir-4819
|
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| Node of Origin (locus) |
Enteropneusta
|
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| Node of Origin (family) |
Enteropneusta
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Genome context
(Pfl) |
LD344947.1: 75194-75252 [+]
|
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| Seed |
CUUGGAC |
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Precursor
(pre-Mir +30nt flank) |
CCGAUCGCCUUUGAUUCGAUAAUUGCCCUCACUUGGACAUAAUGGAUGCGAGUUUGUAAAACCAUCUCGCGUCCGUUCUGUUCAUGAGUGGGAGUUAUUUUAAAACGCAACUUCGGAAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CCGAUCGCCUUUGAUUC--- G -| CU U UUUGUA
GAUAAUU CC CUCA UGGACA AAUGGAUGCGAG \
UUAUUGA GG GAGU ACUUGU UUGCCUGCGCUC A
AAAGGCUUCAACGCAAAAUU G U^ -- C UACCAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There are multiple Dicer cuts on the 3p arm +1 and +3 relative to what is annotate here. |
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Pfl-Mir-4819_5p |
| mirBase accession | None |
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| Sequence |
0- ACUUGGACAUAAUGGAUGCGAG -22
Get sequence
|
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| Star sequence |
Pfl-Mir-4819_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- CGCGUCCGUUCUGUUCAUGAGU -59
Get sequence
|
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