MirGeneDB ID | Pab-Mir-4637 |
Family name |
MIR-4637 (all species) |
Species |
Sumatran orangutan (Pongo abelii) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Hsa-Mir-4637
Mml-Mir-4637
|
Node of Origin (locus) |
Catarrhini
|
Node of Origin (family) |
Catarrhini
|
Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054683.2: 15204518-15204589 [-]
UCSC
Ensembl
|
Seed |
ACUAACU |
Precursor (pre-Mir +30nt flank) |
UUCGUCCUGGAAAAAUUAGUUAGGACUCUUACUUGGAUCUGCAAUUAGUAUUUUAAUCAUAGAUUGUAUUUAGUUUUCAGUACUAACUGCAGAUUCAAGUGAGGGUUCUAACCCUAACCUCUAGAUUUUCAU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UUCGUCCUGGAAAAAUUA--| A UUAAUCAUAGAU
GUUAGGACUCUUACUUGGAUCUGCA UUAGUAUU U
CAAUCUUGGGAGUGAACUUAGACGU AAUCAUGA G
UACUUUUAGAUCUCCAAUCC^ C CUUUUGAUUUAU
130 120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Pab-Mir-4637_5p* (predicted) |
mirBase accession | None |
Sequence |
0- ACUUGGAUCUGCAAUUAGUAUU -22
Get sequence
|
Mature sequence |
Pab-Mir-4637_3p |
mirBase accession | None |
Sequence |
50- UACUAACUGCAGAUUCAAGUGA -72
Get sequence
|