| MirGeneDB ID | Pab-Mir-3934 |
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| Family name |
MIR-3934 (all species) |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Hsa-Mir-3934
Mml-Mir-3934
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| Node of Origin (locus) |
Catarrhini
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| Node of Origin (family) |
Catarrhini
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054684.2: 33946661-33946721 [+]
UCSC
Ensembl
|
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| Seed |
CAGGUGU |
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Precursor
(pre-Mir +30nt flank) |
GCUCCACACAGCCCUUCCUGUCCCCAAUUUUCAGGUGUGGAAUCUGAGGCAGGAAGCAGUGAAGUAACUUGCUCAGGUUGCACAGCUGGGAAGUGGAGCAGGGAUUUGGAUCCUUGUGUGU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GCUCCACACAGCCCUUC---| CC A UU G G G AAGCAG
CUGU CCA UU CAG UGUG AAUCUGAG CAGG U
GACG GGU AA GUC ACAC UUGGACUC GUUC G
UGUGUGUUCCUAGGUUUAGG^ A- G GG G G - AAUGAA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
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| Mature sequence |
Pab-Mir-3934_5p |
| mirBase accession | None |
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| Sequence |
0- UCAGGUGUGGAAUCUGAGGCAGG -23
Get sequence
|
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| Co-mature sequence |
Pab-Mir-3934_3p (predicted) |
| mirBase accession | None |
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| Sequence |
39- UGCUCAGGUUGCACAGCUGGGA -61
Get sequence
|
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