| MirGeneDB ID | Ovu-Novel-31 |
|---|
| Family name |
COL-NOVEL-31 (all species) |
|---|
| Seed |
ACGUGUC |
|---|
| Species |
Common octopus (Octopus vulgaris) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Esc-Novel-31
Obi-Novel-31
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
|---|
Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01057088.1: 120944-121008 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UUAUGGACCAUUCGCUACUGCUGUUCGGCUUACGUGUCACCUACAGCCAUGCUGGUCAGGUGUCUAAGACAGCAUGGCAUAUGUGACUCGAAAAGUCGUGUGAGUCAGAAAUCAGCAAAAGAAUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UUAUGGACCAUUCGCUACU- GUU- A-| U C CA GGUCAGGU
GCU CGGCUU CG GUCAC UA GCCAUGCU \
UGA GCUGAA GC CAGUG AU CGGUACGA G
AUAAGAAAACGACUAAAGAC GUGU AA^ U U A- CAGAAUCU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Ovu-Novel-31_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UACGUGUCACCUACAGCCAUGCU -23
Get sequence
|
|---|
| Co-mature sequence |
Ovu-Novel-31_3p |
| mirBase accession | None |
|---|
| Sequence |
42- CAUGGCAUAUGUGACUCGAAAAG -65
Get sequence
|
|---|
