MirGeneDB 2.1

MirGeneDB ID

Obi-Novel-31

Family name COL-NOVEL-31 (all species)
Seed ACGUGUC
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues
Orthologues Esc-Novel-31  Ovu-Novel-31 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(PRJNA270931_OBI)
KQ417215: 215788-215852 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUAUGGACCAUUCGCUACUGCUGUUCGGCUUACGUGUCACCUACAGCCAUGCUGGUCAGGUGUCUAAGACAGCAUGGCAUAUGUGACUCGAAAAGUCGUGUGAGUCAGAAAUCAGCAAAAGAAUA
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Structure
        10         20         30         40        50        60  
UUAUGGACCAUUCGCUACU-   GUU-      A-| U     C  CA       UGGUCAGGU 
                    GCU    CGGCUU  CG GUCAC UA  GCCAUGC         \
                    UGA    GCUGAA  GC CAGUG AU  CGGUACG         G
AUAAGAAAACGACUAAAGAC   GUGU      AA^ U     U  A-       ACAGAAUCU 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Obi-Novel-31_5p

mirBase accessionNone
Sequence
0- UACGUGUCACCUACAGCCAUGC -22
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Star sequence

Obi-Novel-31_3p*

mirBase accessionNone
Sequence
43- AUGGCAUAUGUGACUCGAAAAG -65
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