Mir-184-P27

MirGeneDB ID

Ovu-Mir-184-P27

Family name

MIR-184 (all species)

Seed

GGACGGA

Species

Common octopus (Octopus vulgaris)

MiRBase ID

Paralogues

Ovu-Mir-184-P26

Orthologues

Aae-Mir-184 Aca-Mir-184 Ami-Mir-184 Asu-Mir-184 Bfl-Mir-184 Bge-Mir-184 Bla-Mir-184 Bpl-Mir-184 Bta-Mir-184 Cfa-Mir-184 Cin-Mir-184 Cli-Mir-184 Cmi-Mir-184 Cpi-Mir-184 Cpo-Mir-184 Dan-Mir-184 Dma-Mir-184 Dme-Mir-184 Dmo-Mir-184 Dno-Mir-184 Dpu-Mir-184 Dsi-Mir-184 Dya-Mir-184 Esc-Mir-184 Ete-Mir-184 Gga-Mir-184 Gja-Mir-184 Hme-Mir-184 Hsa-Mir-184 Isc-Mir-184 Lan-Mir-184 Lch-Mir-184 Loc-Mir-184 Mdo-Mir-184 Mml-Mir-184 Mmu-Mir-184 Npo-Mir-184 Oan-Mir-184 Obi-Mir-184-P27 Ocu-Mir-184 Pbv-Mir-184 Pfl-Mir-184 Pma-Mir-184 Pmi-Mir-184 Rno-Mir-184 Sha-Mir-184 Sko-Mir-184 Sme-Mir-184-P27 Spt-Mir-184 Spu-Mir-184 Sto-Mir-184 Tca-Mir-184 Tgu-Mir-184 Xtr-Mir-184

Node of Origin (locus)

Octopus

Node of Origin (family)

Bilateria

Genome context
(GCA_003957725.1_ASM395772v1_OVU)

RXHP01036341.1: 91989-92047 [+] Ensembl

Precursor
(pre-Mir +30nt flank)

CUGUGUGUACGCGUUUAUUUGCUAAUGACUCCUUGUCACUUACUCGUCUAGUCUGUCAAAUAAGAACUGGACGGAGAACUGAUAAGGGCUUGCCAGGCAUGCAUACAUCUGAUACUAGC

Get precursor sequence

Structure

        10         20         30        40        50         
CUGUGUGUACGCGUUUAUU-    AA-|  CU        C  AC         CUGUCA 
                    UGCU   UGA  CCUUGUCA UU  UCGUCUAGU      \
                    ACGG   GUU  GGAAUAGU AA  GGCAGGUCA      A
CGAUCAUAGUCUACAUACGU    ACC^  CG        C  GA         AGAAUA 
       110       100        90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc	Oc

Star sequence

Ovu-Mir-184-P27_5p*

mirBase accession

None

Sequence

0- CCUUGUCACUUACUCGUCUAGU -22

Get sequence

Mature sequence

Ovu-Mir-184-P27_3p

mirBase accession

None

Sequence

37- UGGACGGAGAACUGAUAAGGGC -59

Get sequence