MirGeneDB 3.0
MirGeneDB ID

Ovu-Mir-12566-P2

Family name MIR-12566 (all species)
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues Ovu-Mir-12566-P1  Ovu-Mir-12566-P3 
Orthologues Obi-Mir-12566-P2 
Node of Origin (locus) Octopus
Node of Origin (family) Octopus
Genome context
(GCA_003957725.1_ASM395772v1_OVU)		 RXHP01027681.1: 324639-324697 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-12566-P2)		 Mir-12566-P1 RXHP01027681.1: 321400-321459 [+] Ensembl
Mir-12566-P2 RXHP01027681.1: 324639-324697 [+] Ensembl
Mir-12566-P3 RXHP01027681.1: 325766-325826 [+] Ensembl
Seed GUGAUUU
Precursor
(pre-Mir +30nt flank)		 
AAAUUUUCUGAUUUGUUGCUUUUGAUGACAAGUGAUUUGGAACGCAUUUAGCAGUAUGUUAAAUUCUGAAAUGCGAUCCAAAUCACUUGAUAUGAUUAGCACUGCGACUGAUGGAUGAC
Get precursor sequence
Structure
        10          20        30        40        50          
AAAUUUUCUGAUUUGUU--|  UUUG   A             A       AG   UAUGU 
                   GCU    AUG CAAGUGAUUUGGA CGCAUUU  CAG     \
                   CGA    UAU GUUCACUAAACCU GCGUAAA  GUC     U
CAGUAGGUAGUCAGCGUCA^  UUAG   A             A       --   UUAAA 
       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Ax Ce Fr He In Op Op Pe Po Re Sk St Su Su Te Ve Vi Wh
Mature sequence

Ovu-Mir-12566-P2_5p
mirBase accessionNone
Sequence 
0- AGUGAUUUGGAACGCAUUUAGCAG -24
Get sequence
Star sequence

Ovu-Mir-12566-P2_3p*
mirBase accessionNone
Sequence 
37- GAAAUGCGAUCCAAAUCACUUG -59
Get sequence