| MirGeneDB ID | Obi-Novel-25-v1 |
|---|
| Family name |
COL-NOVEL-25 (all species) |
|---|
| Seed |
UUAAGAC |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
|---|
| Paralogues |
Obi-Novel-25-v2
|
|---|
| Orthologues |
Esc-Novel-25-v1
Ovu-Novel-25-v1
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ415759: 381806-381865 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UCUUUCUCAGAAGAUCGAGGACUCCUGUACCCCGUGUAACAGUUCUGAGACCUAGAAUAUAAGACGAGGUUUAAGACUGUCCCACGGGCUAAAGGAAUCUAUUUAGCAGCACGAGACCUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCUUUCUCAGAAGAUCGA--| C G C UA U G UAGAAUA
GGA UCCU UA CCCGUG ACAGU CU AGACC \
UCU AGGA AU GGGCAC UGUCA GA UUUGG U
AUCCAGAGCACGACGAUUUA^ A A C CC - A AGCAGAA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Obi-Novel-25-v1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CCCGUGUAACAGUUCUGAGACC -22
Get sequence
|
|---|
| Mature sequence |
Obi-Novel-25-v1_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UUUAAGACUGUCCCACGGGCU -60
Get sequence
|
|---|
