MirGeneDB 2.1

MirGeneDB ID

Obi-Novel-25-v2

Family name COL-NOVEL-25 (all species)
Seed UUUAAGA
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues Obi-Novel-25-v1 
Orthologues Esc-Novel-25-v2  Ovu-Novel-25-v2 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(PRJNA270931_OBI)
KQ415759: 381807-381864 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUUUCUCAGAAGAUCGAGGACUCCUGUACCCCGUGUAACAGUUCUGAGACCUAGAAUAUAAGACGAGGUUUAAGACUGUCCCACGGGCUAAAGGAAUCUAUUUAGCAGCACGAGACCU
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Structure
        10          20        30        40        50         
CUUUCUCAGAAGAUCGA--|  C    G  C      UA     U  G      AGAAUA 
                   GGA UCCU UA CCCGUG  ACAGU CU AGACCU      \
                   UCU AGGA AU GGGCAC  UGUCA GA UUUGGA      U
UCCAGAGCACGACGAUUUA^  A    A  C      CC     -  A      GCAGAA 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
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To
Star sequence

Obi-Novel-25-v2_5p*

mirBase accessionNone
Sequence
0- CCGUGUAACAGUUCUGAGACCU -22
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Mature sequence

Obi-Novel-25-v2_3p

mirBase accessionNone
Sequence
37- GUUUAAGACUGUCCCACGGGC -58
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