MirGeneDB 2.1

MirGeneDB ID

Esc-Novel-25-v1

Family name COL-NOVEL-25 (all species)
Seed UCGUGUA
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues Esc-Novel-25-v2 
Orthologues Obi-Novel-25-v1  Ovu-Novel-25-v1 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(GCA_004765925.1_miRNA_LOCI)
Esc-Novel-25-v1_pre_SRIE01050902.1:2194681-2194822: 42-101 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GCACGUUCAUUUUGAAUCGGUCUAACGUAACUCGUGUAACAGUUCUGAAGCCUGGAACAUUUGACGAGGUUUAAGACUGUCCCACGGGCUAAGUGAGGCUUGCAAACAUCAUGAUUUUUU
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Structure
        10          20        30        40        50          
GCACGUUCAUUUUGAAUC--|    A  G  A      UA     U  G     UGGAACA 
                    GGUCU AC UA CUCGUG  ACAGU CU AAGCC       \
                    UCGGA UG AU GGGCAC  UGUCA GA UUUGG       U
UUUUUUAGUACUACAAACGU^    G  A  C      CC     -  A     AGCAGUU 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ce Li
Mature sequence

Esc-Novel-25-v1_5p

mirBase accessionNone
Sequence
0- CUCGUGUAACAGUUCUGAAGCC -22
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Co-mature sequence

Esc-Novel-25-v1_3p

mirBase accessionNone
Sequence
39- UUUAAGACUGUCCCACGGGCU -60
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