MirGeneDB 3.0

MirGeneDB ID

Obi-Mir-12559-P1

Family name MIR-12559 (all species)
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues Obi-Mir-12559-P2 
Orthologues Ovu-Mir-12559-P1 
Node of Origin (locus) Octopus
Node of Origin (family) Octopus
Genome context
(PRJNA270931_OBI)
KQ415882: 267322-267380 [-] Ensembl
Seed GCUGGAA
Precursor
(pre-Mir +30nt flank)
GCAAUAUCUAAAUAUGAGGUGUCCACUGAAUGCUGGAAGACGGGUAAUGGGUGUACAAUACUGGAGCACCCAAUCAGUCGUCCAACAUCCAGAGGAUUCUGCGCUACUCCGAAUGAGAA
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Structure
        10          20        30        40        50          
GCAAUAUCUAAAUAUGA--| U    A   A   C    A   G   AA       ACAAU 
                   GG GUCC CUG AUG UGGA GAC GGU  UGGGUGU     \
                   UC UAGG GAC UAC ACCU CUG CUA  ACCCACG     A
AAGAGUAAGCCUCAUCGCG^ U    A   C   A    G   A   --       AGGUC 
       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Obi-Mir-12559-P1_5p

mirBase accessionNone
Sequence
0- UGCUGGAAGACGGGUAAUGGGUGU -24
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Star sequence

Obi-Mir-12559-P1_3p*

mirBase accessionNone
Sequence
37- ACCCAAUCAGUCGUCCAACAUC -59
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