MirGeneDB 2.1

MirGeneDB ID

Nve-Mir-9424-P2

Family name MIR-9424 (all species)
Seed AUAGUUG
Species Starlet sea anemone (Nematostella vectensis)
MiRBase ID nve-mir-9424a
Paralogues Nve-Mir-9424-P1 
Orthologues
Node of Origin (locus) N. vectensis
Node of Origin (family) N. vectensis
Genome context
(GCF_000209225.1_ASM20922v1_NVE)
NW_001834350.1: 776993-777046 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GCAAGCUCAUCAGACACCGUCCUUAAAGACUGCCUCGAUAAACCAGCUUUACAGAUAUCUGUAUAGUUGGCUCAUCGAGGCAGUCUUAAAUGACGGUAUGUCCAAGACUGUUUC
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Structure
        10          20        30        40        50      
GCAAGCUCAUCAGACAC--|   C  A              AAA      U    GA 
                   CGUC UU AAGACUGCCUCGAU   CCAGCU UACA  U
                   GCAG AA UUCUGACGGAGCUA   GGUUGA AUGU  A
CUUUGUCAGAACCUGUAUG^   U  A              CUC      U    CU 
  110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
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Star sequence

Nve-Mir-9424-P2_5p*

mirBase accessionNone
Sequence
0- UGCCUCGAUAAACCAGCUUUACA -23
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Mature sequence

Nve-Mir-9424-P2_3p

mirBase accessionMIMAT0035383
Sequence
31- UAUAGUUGGCUCAUCGAGGCAGU -54
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