| MirGeneDB ID | Nve-Mir-2037 |
|---|
| Family name |
MIR-2037 (all species) |
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| Species |
Starlet sea anemone (Nematostella vectensis) |
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| MiRBase ID |
nve-mir-2037
|
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| Paralogues |
|
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| Orthologues |
Asp-Mir-2037
|
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| Node of Origin (locus) |
Anenthemonae
|
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| Node of Origin (family) |
Anenthemonae
|
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Genome context
(GCF_000209225.1_ASM20922v1_NVE) |
NW_001833981.1: 29639-29691 [+]
Ensembl
|
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| Seed |
GUGAUUG |
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Precursor
(pre-Mir +30nt flank) |
CAUGAGAUGGAGCUAGGUCUUGGUCACCGUGGUAAAAGCCGUCCAAGCACCCUCUUGGCAGUGUGAUUGGAGACUUUUACCGUGGUCUGAGAUCAGUCAUACCCGGCGAACUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAUGAGAUGGAGCUAGG----| UG UC CCG -- CCUC
UCU G ACCGUGGUAAAAG UCCAA GCAC U
AGA C UGGUGCCAUUUUC AGGUU UGUG U
GUCAAGCGGCCCAUACUGACU^ GU -- AG- AG ACGG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Nve-Mir-2037_5p* |
| mirBase accession | MIMAT0009796 |
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| Sequence |
0- GGUAAAAGCCGUCCAAGCACC -21
Get sequence
|
|---|
| Mature sequence |
Nve-Mir-2037_3p |
| mirBase accession | MIMAT0009797 |
|---|
| Sequence |
31- UGUGAUUGGAGACUUUUACCGU -53
Get sequence
|
|---|
