MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-7383-P5c

Family name MIR-7383 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-7383-P5a  Neu-Mir-7383-P5b  Neu-Mir-7383-P6 
Orthologues
Node of Origin (locus) N. eugenii
Node of Origin (family) Marsupialia
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051820.1: 19451016-19451074 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7383-P5c)
Mir-7383-P6 CM051820.1: 19407975-19408033 [+] UCSC Ensembl
Mir-7383-P5a CM051820.1: 19451016-19451074 [+] UCSC Ensembl
Mir-7383-P5c CM051820.1: 19451016-19451074 [+] UCSC Ensembl
Seed AAGGUAC
Precursor
(pre-Mir +30nt flank)
UUCUCUCACCUCCUCAUGACUGGAGUAUUCCAAGGUACCUGAGGUCCUCUUAUUUUAUAUUGGUUGUAAGAGGCUCCAGCUCCCUUUGUCUACCCCAGUAUAAAACUCCACUCCCACUG
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Structure
        10          20        30        40        50         
UUCUCUCACCUCCUCAUG--|    A   UUCC    UAC   AG U       UUUUAU 
                    ACUGG GUA    AAGG   CUG  G CCUCUUA      A
                    UGACC CAU    UUCC   GAC  C GGAGAAU      U
GUCACCCUCACCUCAAAAUA^    C   CUGU    CUC   CU -       GUUGGU 
       110       100        90        80         70        60
Deep sequencing
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CommentThere is a second Dicer cut +1 on both arms.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-7383-P5c_5p

mirBase accessionNone
Sequence
0- CAAGGUACCUGAGGUCCUCUUA -22
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Star sequence

Neu-Mir-7383-P5c_3p*

mirBase accessionNone
Sequence
38- AGAGGCUCCAGCUCCCUUUGU -59
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