| MirGeneDB ID | Neu-Mir-12355 |
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| Family name |
MIR-12355 (all species) |
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| Species |
Tammar Wallaby (Notamacropus eugenii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Mdo-Mir-12355
Sha-Mir-12355
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051817.1: 53213857-53213915 [+]
UCSC
Ensembl
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| Seed |
CGGAGGU |
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Precursor
(pre-Mir +30nt flank) |
UUUCCUGGGUGUGGCCUGGACUAGAUGGCUGCGGAGGUCCGUUUCCACUCUGAAGUUAUGUGAUUCAGAGCUGGAAUGGACCUCAGAGGUCAUCUAGUCUCAUCUCUUCUUUGCACAGA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUUCCUGGGUGUGGCCU--| GCG U - AAGUUA
GGACUAGAUGGCU GAGGUCCGUU CCA CUCUG \
UCUGAUCUACUGG CUCCAGGUAA GGU GAGAC U
AGACACGUUUCUUCUCUAC^ AGA - C UUAGUG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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| Mature sequence |
Neu-Mir-12355_5p |
| mirBase accession | None |
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| Sequence |
0- GCGGAGGUCCGUUUCCACUCUG -22
Get sequence
|
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| Star sequence |
Neu-Mir-12355_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
37- GAGCUGGAAUGGACCUCAGAGG -59
Get sequence
|
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