| MirGeneDB ID | Mml-Mir-887 |
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| Family name |
MIR-887 (all species) |
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| Species |
Rhesus monkey (Macaca mulatta) |
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| MiRBase ID |
mml-mir-887
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| Paralogues |
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| Orthologues |
Cja-Mir-887
Hsa-Mir-887
Pab-Mir-887
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| Node of Origin (locus) |
Simiiformes
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| Node of Origin (family) |
Simiiformes
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Genome context
(GCA_003339765.3_Mmul_10_traces) |
CM014341.1: 16178840-16178902 [+]
UCSC
Ensembl
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| Seed |
UGAACGG |
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Precursor
(pre-Mir +30nt flank) |
GAUGCCGUCAGAGAGCCCCGGGAUGCAGAUCCUUGGGAGCCCUGUUAGACUCUGGAUUUUACACUUGGAGUGAACGGGCGCCAUCCCGAGGCUUUGCACAGGGGCAAGCUUCGAGUUCCAUUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GAUGCCGUCAGAGAGCC---- GGGA U -- -| AG UGGAUUU
CC UGCAGA CCUUGGGA GC CCUGUU ACUC \
GG ACGUUU GGAGCCCU CG GGGCAA UGAG U
UUUACCUUGAGCUUCGAACGG AC-- C AC C^ G- GUUCACA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There is a second Drosha cut -1 on both arms. |
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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| Star sequence |
Mml-Mir-887_5p* |
| mirBase accession | None |
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| Sequence |
0- CCUUGGGAGCCCUGUUAGACUC -22
Get sequence
|
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| Mature sequence |
Mml-Mir-887_3p |
| mirBase accession | MIMAT0006526 |
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| Sequence |
39- GUGAACGGGCGCCAUCCCGAGGCU -63
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-887
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