| MirGeneDB ID | Mml-Mir-3145 |
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| Family name |
MIR-3145 (all species) |
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| Species |
Rhesus monkey (Macaca mulatta) |
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| MiRBase ID |
mml-mir-3145
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| Paralogues |
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| Orthologues |
Cja-Mir-3145
Hsa-Mir-3145
Pab-Mir-3145
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| Node of Origin (locus) |
Simiiformes
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| Node of Origin (family) |
Simiiformes
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Genome context
(GCA_003339765.3_Mmul_10_traces) |
CM014339.1: 42059194-42059255 [-]
UCSC
Ensembl
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| Seed |
AUUUUGA |
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Precursor
(pre-Mir +30nt flank) |
UGAAAGGAAAAAAUGUAUUCAUAUAAGGUCAACUCCAAACAUUCAAAACGCAUUGUUGAAUGGAAUUAGGUAUUUUGAGUGUUUGGAAUUGAACUUGUAUGCACUGAUACACCAAUACCAGU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UGAAAGGAAAAAAUGUAUU--| G C CG AUUGUUGA
CAUAUAAG UCAA UCCAAACAUUCAAAA C A
GUAUGUUC AGUU AGGUUUGUGAGUUUU G U
UGACCAUAACCACAUAGUCAC^ A A AU GAUUAAGG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | Because of a secondary structural difference between human and macaque the major form of the mature 3p arm is shifted -3 relative to human |
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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| Star sequence |
Mml-Mir-3145_5p* (predicted) |
| mirBase accession | MIMAT0027120 |
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| Sequence |
0- AACUCCAAACAUUCAAAACGCAU -23
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-3145-5p
|
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| Mature sequence |
Mml-Mir-3145_3p |
| mirBase accession | MIMAT0024349 |
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| Sequence |
40- UAUUUUGAGUGUUUGGAAUUGA -62
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-3145-3p
|
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