MirGeneDB ID | Lpo-Mir-184-P20 |
Family name |
MIR-184 (all species) |
Seed |
GGACGGA |
Species |
Atlantic horseshoe crab (Limulus polyphemus) |
MiRBase ID |
|
Paralogues |
Lpo-Mir-184-P18
Lpo-Mir-184-P19
Lpo-Mir-184-P21
Lpo-Mir-184-P22
Lpo-Mir-184-P23
|
Orthologues |
Aae-Mir-184
Aca-Mir-184
Ami-Mir-184
Asu-Mir-184
Bfl-Mir-184
Bge-Mir-184
Bla-Mir-184
Bpl-Mir-184
Bta-Mir-184
Cfa-Mir-184
Cin-Mir-184
Cli-Mir-184
Cmi-Mir-184
Cpi-Mir-184
Cpo-Mir-184
Dan-Mir-184
Dma-Mir-184
Dme-Mir-184
Dmo-Mir-184
Dno-Mir-184
Dpu-Mir-184
Dsi-Mir-184
Dya-Mir-184
Esc-Mir-184
Ete-Mir-184
Gga-Mir-184
Gja-Mir-184
Hme-Mir-184
Hsa-Mir-184
Isc-Mir-184
Lan-Mir-184
Lch-Mir-184
Loc-Mir-184
Mdo-Mir-184
Mml-Mir-184
Mmu-Mir-184
Npo-Mir-184
Oan-Mir-184
Ocu-Mir-184
Pbv-Mir-184
Pfl-Mir-184
Pma-Mir-184
Pmi-Mir-184
Rno-Mir-184
Sha-Mir-184
Sko-Mir-184
Spt-Mir-184
Spu-Mir-184
Sto-Mir-184
Tca-Mir-184
Tgu-Mir-184
Xtr-Mir-184
|
Node of Origin (locus) |
L. polyphemus
|
Node of Origin (family) |
Bilateria
|
Genome context (GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic) |
NW_013674456.1: 12669-12727 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AUGAUUAACGUGCCAUUCGGCUUCACGUUCCCUUAUCAUUCGACUGUCCAGACAGUAUUUAUAUCUCUGGACGGAGAACUGAUAAGGGCUUGUGGAGGCCACGAUUUCUUCAGUUCAGU
Get precursor sequence
|
Structure | 10 20 30 40 50
AUGAUUAACGUGCCAUUC- - UU -| GA CAGUAU
GGCUU CACG CCCUUAUCA UUC CUGUCCAGA \
CCGGA GUGU GGGAAUAGU AAG GGCAGGUCU U
UGACUUGACUUCUUUAGCA G UC C^ A- CUAUAU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Lpo-Mir-184-P20_5p* |
mirBase accession | None |
Sequence |
0- CCUUAUCAUUCGACUGUCCAGA -22
Get sequence
|
Mature sequence |
Lpo-Mir-184-P20_3p |
mirBase accession | None |
Sequence |
37- UGGACGGAGAACUGAUAAGGGC -59
Get sequence
|