| MirGeneDB ID | Loc-Mir-734 |
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| Family name |
MIR-734 (all species) |
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| Species |
Spotted gar (Lepisosteus oculatus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Dre-Mir-734
Gmo-Mir-734
Mal-Mir-734
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| Node of Origin (locus) |
Neopterygii
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| Node of Origin (family) |
Neopterygii
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Genome context
(LepOcu1) |
LG14: 23825473-23825532 [-]
Ensembl
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| Seed |
AAAUGCU |
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Precursor
(pre-Mir +30nt flank) |
CUCGUCAUGUCCUCUUUGAUUUCAAGAGCUGAACUAUUCUGCAACAUUUGUUCAUGUGGUUCUGCUAGUAAAUGCUGCAGAAUUGUGCUUCUCUUAAAAUCAUUCAUCUUCAAACUCACC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CUCGUCAUGUCCUCUUU--| C CUGA U A UUCAUGUG
GAUUU AAGAG AC AUUCUGCA CAUUUG G
CUAAA UUCUC UG UAAGACGU GUAAAU U
CCACUCAAACUUCUACUUA^ A UUCG U C GAUCGUCU
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Br |
Br |
He |
He |
He |
He |
Ov |
Ov |
Ov |
Ov |
Te |
Te |
Te |
Te |
To |
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| Star sequence |
Loc-Mir-734_5p* |
| mirBase accession | None |
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| Sequence |
0- GAACUAUUCUGCAACAUUUGUU -22
Get sequence
|
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| Mature sequence |
Loc-Mir-734_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UAAAUGCUGCAGAAUUGUGCUU -60
Get sequence
|
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