MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-589

Family name MIR-589 (all species)
Species Human (Homo sapiens)
MiRBase ID hsa-mir-589
Paralogues
Orthologues Cja-Mir-589  Mml-Mir-589  Pab-Mir-589 
Node of Origin (locus) Primates
Node of Origin (family) Primates
Genome context
(hg38)
chr7: 5495834-5495894 [-] UCSC Ensembl
Seed GAGAACC
Precursor
(pre-Mir +30nt flank)
GACAAACUCCAGCCUGUGCCCAGCAGCCCCUGAGAACCACGUCUGCUCUGAGCUGGGUACUGCCUGUUCAGAACAAAUGCCGGUUCCCAGACGCUGCCAGCUGGCCCCGUUCCUCUGGAUU
Get precursor sequence
Structure
        10           20        30         40        50         
GACAAACUCCAGCCUGU---| CCA     CC   A     A-   C  C       UGGGU 
                    GC   GCAGC  CUG GAACC  CGU UG UCUGAGC     A
                    CG   CGUCG  GAC CUUGG  GUA AC AGACUUG     C
UUAGGUCUCCUUGCCCCGGU^ AC-     CA   C     CC   A  A       UCCGU 
 .       110       100         90        80        70        60
Deep sequencing
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CommentAlthough absent in M. murinus this locus is present in other lemurs.
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-589_5p

mirBase accessionMIMAT0004799
Sequence
0- UGAGAACCACGUCUGCUCUGAGC -23
Get sequence
Proposed targets microrna.org: MIMAT0004799
TargetScanVert: hsa-miR-589-5p
TargetMiner: hsa-miR-589-5p
miRDB: MIMAT0004799
Star sequence

Hsa-Mir-589_3p*

mirBase accessionMIMAT0003256
Sequence
37- UCAGAACAAAUGCCGGUUCCCAGA -61
Get sequence
Proposed targets microrna.org: MIMAT0003256
TargetScanVert: hsa-miR-589-3p
TargetMiner: hsa-miR-589-3p
miRDB: MIMAT0003256