MirGeneDB 3.0
MirGeneDB ID

Hsa-Mir-3144

Family name MIR-3144 (all species)
Species Human (Homo sapiens)
MiRBase ID hsa-mir-3144
Paralogues
Orthologues Pab-Mir-3144 
Node of Origin (locus) Catarrhini
Node of Origin (family) Catarrhini
Genome context
(hg38)		 chr6: 120015190-120015248 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-3144-v1)		 Mir-3144-v1 chr6: 120015190-120015248 [+] UCSC Ensembl
Mir-3144-v2 chr6: 120015191-120015247 [+] UCSC Ensembl
Variant

Hsa-Mir-3144-v1
Seed AGGGGAC
Precursor
(pre-Mir +30nt flank)		 
CAGGAAAACAUCAGACUGAAACUACACUUUAAGGGGACCAAAGAGAUAUAUAGAUAUCAGCUACCUAUAUACCUGUUCGGUCUCUUUAAAGUGUAGUUUAACUGAUUUUUUAAUGGAUA
Get precursor sequence
Structure
        10          20        30        40        50         
CAGGAAAACAUCAGACUG--|                    A  G  A      GAUAUC 
                    AAACUACACUUUAAGGGGACC AA AG UAUAUA      \
                    UUUGAUGUGAAAUUUCUCUGG UU UC AUAUAU      A
AUAGGUAAUUUUUUAGUCAA^                    C  G  C      CCAUCG 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-3144-v1_5p
mirBase accessionMIMAT0015014
Sequence 
0- AAGGGGACCAAAGAGAUAUAUA -22
Get sequence
Proposed targets microrna.org: MIMAT0015014
TargetScanVert: hsa-miR-3144-5p
TargetMiner: hsa-miR-3144-5p
miRDB: MIMAT0015014
Star sequence

Hsa-Mir-3144-v1_3p*
mirBase accessionMIMAT0015015
Sequence 
37- UAUACCUGUUCGGUCUCUUUAA -59
Get sequence
Proposed targets microrna.org: MIMAT0015015
TargetScanVert: hsa-miR-3144-3p
TargetMiner: hsa-miR-3144-3p
miRDB: MIMAT0015015
Variant

Hsa-Mir-3144-v2
Seed GGGGACC
Precursor
(pre-Mir +30nt flank)		 
AGGAAAACAUCAGACUGAAACUACACUUUAAGGGGACCAAAGAGAUAUAUAGAUAUCAGCUACCUAUAUACCUGUUCGGUCUCUUUAAAGUGUAGUUUAACUGAUUUUUUAAUGGAU
Get precursor sequence
Structure
        10          20        30        40        50        
AGGAAAACAUCAGACUG--|                    A  G  A      GAUAUC 
                   AAACUACACUUUAAGGGGACC AA AG UAUAUA      \
                   UUUGAUGUGAAAUUUCUCUGG UU UC AUAUAU      A
UAGGUAAUUUUUUAGUCAA^                    C  G  C      CCAUCG 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-3144-v2_5p
mirBase accessionMIMAT0015014
Sequence 
0- AGGGGACCAAAGAGAUAUAUA -21
Get sequence
Proposed targets microrna.org: MIMAT0015014
TargetScanVert: hsa-miR-3144-5p
TargetMiner: hsa-miR-3144-5p
miRDB: MIMAT0015014
Star sequence

Hsa-Mir-3144-v2_3p*
mirBase accessionMIMAT0015015
Sequence 
36- UAUACCUGUUCGGUCUCUUUA -57
Get sequence
Proposed targets microrna.org: MIMAT0015015
TargetScanVert: hsa-miR-3144-3p
TargetMiner: hsa-miR-3144-3p
miRDB: MIMAT0015015