MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-3138

Family name MIR-3138 (all species)
Species Human (Homo sapiens)
MiRBase ID hsa-mir-3138
Paralogues
Orthologues Cja-Mir-3138  Mml-Mir-3138  Pab-Mir-3138 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(hg38)
chr4: 10078620-10078681 [-] UCSC Ensembl
Seed CAGUGAG
Precursor
(pre-Mir +30nt flank)
GGGCUGGAGCCUUCCCCUCCCCUCCUCGGCACUUCCCCCACCUCACUGCCCGGGUGCCCACAAGACUGUGGACAGUGAGGUAGAGGGAGUGCCGAGGAGGGCACAGCUGUGCCUCAGAGCCA
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Structure
        10          20        30        40        50        60
GGGCUGGAGCCUUCCCCUC--|                CCC         C  GGGUGCCC 
                     CCCUCCUCGGCACUUCC   ACCUCACUG CC        A
                     GGGAGGAGCCGUGAGGG   UGGAGUGAC GG        C
ACCGAGACUCCGUGUCGACAC^                AGA         A  UGUCAGAA 
120       110       100        90        80        70
Deep sequencing
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CommentMir-3138 was rejected in Fromm et al. (2015).
3' NTU No
MotifsNo
Tissue expression
- +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-3138_5p*

mirBase accessionNone
Sequence
0- ACUUCCCCCACCUCACUGCCC -21
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Mature sequence

Hsa-Mir-3138_3p

mirBase accessionMIMAT0015006
Sequence
41- ACAGUGAGGUAGAGGGAGUGC -62
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Proposed targets microrna.org: MIMAT0015006
TargetScanVert: hsa-miR-3138
TargetMiner: hsa-miR-3138
miRDB: MIMAT0015006