MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-3138

Family name MIR-3138 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-3138  Mml-Mir-3138  Pab-Mir-3138 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021917.1: 180200611-180200672 [+] UCSC Ensembl
Seed ACGGUGA
Precursor
(pre-Mir +30nt flank)		 
GAGCUGGAGCCUUCCCCUGCCCUCCUCAGCACUCCCCCCACUUCACUGCCUAGGUACCCACAAGACUGUAGACGGUGAGGUGGGGGGAGUUCUAAGGAGGGACAGCUGGGCCUGAGAGGCAG
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Structure
        10          20        30        40        50        60
GAGCUGGAGCCUUCCCC-  -|      C  C                  C   GGUACCC 
                  UG CCCUCCU AG ACUCCCCCCACUUCACUG CUA       A
                  AC GGGAGGA UC UGAGGGGGGUGGAGUGGC GAU       C
GACGGAGAGUCCGGGUCG  A^      A  U                  A   GUCAGAA 
120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
To
Star sequence

Cja-Mir-3138_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACUCCCCCCACUUCACUGCCUA -22
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Mature sequence

Cja-Mir-3138_3p
mirBase accessionNone
Sequence 
40- GACGGUGAGGUGGGGGGAGUUC -62
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