MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-1551

Family name MIR-1551 (all species)
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1551
Paralogues
Orthologues
Node of Origin (locus) G. gallus
Node of Origin (family) G. gallus
Genome context
(Gallus_gallus.GRCg6a)		 14: 5612819-5612882 [+] UCSC Ensembl
Seed UAGCAGC
Precursor
(pre-Mir +30nt flank)		 
UUCUUUUGAAAUAAACAGGAGUUACUAUAGCUAGCAGCAAAAAGAACUUCAGAUGUGAUUAACUUGGAGCUCUGAGUUUGUGUUGCUGCUUUCUUAGUGCUCUCUUACAUUCUUCUAUUAGUAU
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Structure
        10            20        30        40        50        60  
UUCUUUUGAAAUAAACA----|    U    U  CU        AAA     U    UGUGAUUA 
                     GGAGU ACUA AG  AGCAGCAA   GAACU CAGA        \
                     UCUCG UGAU UC  UCGUCGUU   UUUGA GUCU        A
UAUGAUUAUCUUCUUACAUUC^    -    -  UU        GUG     -    CGAGGUUC 
  120       110       100          90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-1551_5p
mirBase accessionMIMAT0007405
Sequence 
0- CUAGCAGCAAAAAGAACUUCAGA -23
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Proposed targets TargetScanVert: gga-miR-1551-5p
miRDB: MIMAT0007405
Star sequence

Gga-Mir-1551_3p*
mirBase accessionMIMAT0007406
Sequence 
42- UGAGUUUGUGUUGCUGCUUUCU -64
Get sequence
Proposed targets TargetScanVert: gga-miR-1551-3p
miRDB: MIMAT0007406