| MirGeneDB ID | Gga-Mir-12265 |
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| Family name |
MIR-12265 (all species) |
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| Species |
Chicken (Gallus gallus) |
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| MiRBase ID |
gga-mir-12265
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
G. gallus
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| Node of Origin (family) |
G. gallus
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Genome context
(Gallus_gallus.GRCg6a) |
3: 96496738-96496796 [-]
UCSC
Ensembl
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| Seed |
UGGCUGU |
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Precursor
(pre-Mir +30nt flank) |
CAGAGGAGCGAUCCCACGGAGCGCGCUGCGAUGGCUGUGAGUGCGGCUGAGGUGUCAGAGCAUCCUCCUCAGCCGUCUUGCAGCCUCCUCAGCCCAUGCGCUGCUAUUUUCUGAGUCAU
Get precursor sequence
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| Structure | 10 20 30 40 50
CAGAGGAGCGAUCCCACGGA ---- C-| U UG U UGUCAG
GCGC GCUG GA GGCUG AG GCGGCUGAGG A
CGCG CGAC CU CCGAC UC UGCCGACUCC G
UACUGAGUCUUUUAUCGU-- UACC UC^ - GU - UCCUAC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UGUG in loop |
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Tissue expression
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| Ad |
Ad |
Ad |
Br |
Br |
Ce |
Ce |
Ce |
Ce |
Gg |
He |
He |
Hy |
Hy |
Ki |
Ki |
Li |
Li |
Lu |
Lu |
Ov |
Pr |
Pr |
Sc |
Sc |
Sp |
Sp |
Te |
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| Mature sequence |
Gga-Mir-12265_5p |
| mirBase accession | MIMAT0050020 |
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| Sequence |
0- AUGGCUGUGAGUGCGGCUGAGG -22
Get sequence
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| Star sequence |
Gga-Mir-12265_3p* |
| mirBase accession | MIMAT0050021 |
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| Sequence |
38- UCAGCCGUCUUGCAGCCUCCU -59
Get sequence
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