MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-1249

Family name MIR-1249 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1249  Cfa-Mir-1249  Cja-Mir-1249  Cpo-Mir-1249  Dno-Mir-1249  Eca-Mir-1249  Hsa-Mir-1249  Laf-Mir-1249  Mml-Mir-1249  Mmr-Mir-1249  Mmu-Mir-1249  Ocu-Mir-1249  Pab-Mir-1249  Rno-Mir-1249 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980300: 5358557-5358615 [+] UCSC
Seed CGCCCUU
Precursor
(pre-Mir +30nt flank)		 
CUUGUUCUACAGAUUCUUGUUUGCAUGGGGAGGAGGGAGGAGAUGGGCCAAGUUCCCUCUUCCUGGAACGCCCUUCCCCCCCUUCUUCACCCGGCGAACUCCUACUCGUCCUUCGGACC
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Structure
        10          20         30        40        50        60
CUUGUUCUACAGAUUCUU--|     A    -        A  A  U    CAA    CCUC 
                    GUUUGC UGGG GAGGAGGG GG GA GGGC   GUUC    U
                    CAAGCG GCCC CUUCUUCC CC CU CCCG   CAAG    U
CCAGGCUUCCUGCUCAUCCU^     -    A        C  C  U    ---    GUCC 
       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Ete-Mir-1249_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGAGGGAGGAGAUGGGCCAAGUUC -25
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Mature sequence

Ete-Mir-1249_3p
mirBase accessionNone
Sequence 
37- ACGCCCUUCCCCCCCUUCUUCA -59
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