| MirGeneDB ID | Esc-Novel-9 |
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| Family name |
ESC-NOVEL-9 (all species) |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
E. scolopes
|
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| Node of Origin (family) |
E. scolopes
|
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Genome context
(esc-GCA_024364805.1_ASM2436480v1) |
CM044497.1: 101056710-101056767 [+]
Ensembl
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| Seed |
UUCUCGU |
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Precursor
(pre-Mir +30nt flank) |
UCUACGAUUUCCCGAGCCCGAGCAUCGAAGUCUCGUGCUCACGUGGGGAAAGUUCGAGCCUGAAUCUUUCUCGUCCGAGCACGGGACUUUGAACGCUUGGAUAUGUGAAGGGUACCUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCUACGAUUUCCCGAGC- A-| ACGUG UUCGAG
CCGAGC UCGAAGUCUCGUGCUC GGGAAAG \
GGUUCG AGUUUCAGGGCACGAG CUCUUUC C
UUCCAUGGGAAGUGUAUA CA^ CCUG- UAAGUC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Esc-Novel-9_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UCUCGUGCUCACGUGGGGAAAGU -23
Get sequence
|
|---|
| Mature sequence |
Esc-Novel-9_3p |
| mirBase accession | None |
|---|
| Sequence |
36- UUUCUCGUCCGAGCACGGGACU -58
Get sequence
|
|---|
