| MirGeneDB ID | Esc-Novel-2 |
|---|
| Family name |
CEP-NOVEL-2 (all species) |
|---|
| Seed |
ACACCCG |
|---|
| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
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|---|
| Orthologues |
Npo-Novel-2
Obi-Novel-2
Ovu-Novel-2
|
|---|
| Node of Origin (locus) |
Cephalopoda
|
|---|
| Node of Origin (family) |
Cephalopoda
|
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-2_pre_SRIE01024612.1:268348-268606: 101-159 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUUUUGAAAGCCCACUCGCGGGAGUCGGCGAACACCCGAGUGAGCGGCUGAGGAUUACGAAAUAUGCCGAGCCCUUACGAGGGUGUUCGUUGACAUUCGUACUUCACAGGGAUAUAUGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUUUUGAAAGCCCACUC--| A GA C GA AUUACG
GCGGG GUCGGCGAACACCC GUGAG GGCU GG \
UGCUU CAGUUGCUUGUGGG CAUUC CCGA CC A
CGUAUAUAGGGACACUUCA^ A AG - G- GUAUAA
110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Esc-Novel-2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AACACCCGAGUGAGCGGCUGAGGA -24
Get sequence
|
|---|
| Star sequence |
Esc-Novel-2_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
36- CCGAGCCCUUACGAGGGUGUUCG -59
Get sequence
|
|---|
