| MirGeneDB ID | Esc-Novel-16 |
|---|
| Family name |
ESC-NOVEL-16 (all species) |
|---|
| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
E. scolopes
|
|---|
| Node of Origin (family) |
E. scolopes
|
|---|
Genome context
(esc-GCA_024364805.1_ASM2436480v1) |
CM044506.1: 21756355-21756416 [-]
Ensembl
|
|---|
| Seed |
GCGAACA |
|---|
Precursor
(pre-Mir +30nt flank) |
AUGUGGAUUAACUUUGACCGCAGACUUCUCACUGUCACCCCUUGUUGCUUCCCGUGUGCUCUACCCAGAUGCGAACAGGAUGUGAGCAGUGAGUUAGCCAGCGGAAGUGACAUCAGAUUUCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUGUGGAUUAACUUUGA- AGA U- - CC -| U CCGUGUG
CCGC CU CUCACUG UCAC CUUGUU GC UC C
GGCG GA GAGUGAC AGUG GGACAA CG AG U
CCUUUAGACUACAGUGAA ACC UU G UA G^ U ACCCAUC
120 110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Esc-Novel-16_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- ACUGUCACCCCUUGUUGCUUC -21
Get sequence
|
|---|
| Mature sequence |
Esc-Novel-16_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UGCGAACAGGAUGUGAGCAGUGA -62
Get sequence
|
|---|
